Gene Ajs_2310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2310 
Symbol 
ID4673084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2447999 
End bp2448673 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content69% 
IMG OID639839378 
ProductLexA repressor 
Protein accessionYP_986548 
Protein GI121594652 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.389414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.217511 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACA GTCCCAAGCT CACCGCCCGC CAGCAGCAGA TCCTGGACCT CATCCAGACC 
GCCATCGCGC GCACCGGCGC CCCGCCCACC CGCGCCGAGA TCGCGGCAGA GCTGGGTTTC
AAGTCCGCCA ACGCGGCCGA GGAGCACCTG CAGGCGCTGG CCCGCAAGGG CGTGATCGAA
CTGGTCAGCG GCACCTCGCG CGGCATCCGG CTGCGCGGCG AAACCGTGCG CAACATCAAT
GCGGCGCGCG GCGCCCAGTT CAACCTGCCG ATACCCGGCC TGTCGCAGCT CACGCTGCCG
CTGGTGGGCC GCGTGGCGGC AGGCTCGCCC ATTCTCGCCC AGGAGCATGT GGACCAGACC
TATACGGTGG AAGGCAGCCT GTTTGCGCAC AAGCCCGACT ACCTGCTCAA GGTGCGCGGC
ATGTCCATGC GCGACGCGGG CATCATGGAC GGCGACCTGC TCGCCGTACA GGCAACGCGC
GAGGCGCGCA ACGGGCAAAT CATCGTGGCG CGCCTGGGCG ATGACGTCAC GGTCAAGCGC
CTGCGCCGCA CAGGCAGCGC CATCGAGCTG CTGCCCGAGA ACCCCGACTA CCCGGTGATC
CGCGTCGAGC CGGGCGAACC TTTCGAGATC GAAGGGCTGG CCGTGGGCCT GATACGCAAC
ACCATGCTCA TGTAG
 
Protein sequence
MLDSPKLTAR QQQILDLIQT AIARTGAPPT RAEIAAELGF KSANAAEEHL QALARKGVIE 
LVSGTSRGIR LRGETVRNIN AARGAQFNLP IPGLSQLTLP LVGRVAAGSP ILAQEHVDQT
YTVEGSLFAH KPDYLLKVRG MSMRDAGIMD GDLLAVQATR EARNGQIIVA RLGDDVTVKR
LRRTGSAIEL LPENPDYPVI RVEPGEPFEI EGLAVGLIRN TMLM