Gene Ajs_2303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2303 
Symbol 
ID4672849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2442981 
End bp2443619 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content68% 
IMG OID639839371 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_986541 
Protein GI121594645 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.466313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0952346 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGTCGA TCATACAAGC CGCGGGCTGG CCGATCTGGC CCCTGATTGC CTGTTCCATC 
CTGGCGCTGG CGCTGGTTTT TGAGCGCTTC GTCGCACTGA AGACCGCCCG TGTGGCCCCC
CCGAAGCTGC TGGACGAGGC CATCTCGGTC TCCTCCAAGT CCATTCCCTC GCCCGATGTG
GTGAACCAGC TGGCGCAGAA CTCGGCCCTG GGCGAAGTGC TGGCCAGCGG CCTGCGCACG
CTCAACAGCA ACCCCCAGAG CACCGAGGCC GACGTGCGCG CCGCCATGGA GGGCGCGGGC
CGCGCCGTCG CCCACCGGCT GGAGAAGTAC CTCAACGCCC TGGCCACCAT CGCCTCGGCC
GCACCGCTGC TGGGCCTGCT GGGCACGGTG ATCGGCATGA TCGAGATCTT CGGCTCCCAG
GCCGGCACGG GCGCCGTGGG CGCGACCGGC GGTGGCAACC CTGCGCAACT GGCGCACGGC
ATCTCCATTG CGCTGTACAA CACCGCCTTC GGCCTGATCG TGGCCATCCC GGCGCTGATT
TTCTGGCGCT ACTTCCGCAG CCGCGTGGAC GCCTACCTGT TGACGCTGGA ACTGGCGTCC
GAGCAATTCG TGCGGCACAT CAACCGCCTG CGCAAGTGA
 
Protein sequence
MLSIIQAAGW PIWPLIACSI LALALVFERF VALKTARVAP PKLLDEAISV SSKSIPSPDV 
VNQLAQNSAL GEVLASGLRT LNSNPQSTEA DVRAAMEGAG RAVAHRLEKY LNALATIASA
APLLGLLGTV IGMIEIFGSQ AGTGAVGATG GGNPAQLAHG ISIALYNTAF GLIVAIPALI
FWRYFRSRVD AYLLTLELAS EQFVRHINRL RK