| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2302 |
|---|
| Symbol | |
|---|
| ID | 4672830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 2441267 |
|---|
| End bp | 2442604 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639839370 |
|---|
| Product | exodeoxyribonuclease VII large subunit |
|---|
| Protein accession | YP_986540 |
|---|
| Protein GI | 121594644 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1570] Exonuclease VII, large subunit |
|---|
| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0779138 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTTGAGC GTGCAGATAC AGGCGTGGCG CCGCGAATCT GGGAGGTTGG CGCGTTATGC
CGCGCCATTG CTGATGCGCT GGAGGCGCGG TTCAATCCTG TCGCGGTGCG CGGGGAGATC
ACGGGCTTCT CGCGCGCGTC CAGCGGGCAC TGCTACTTCA CGCTGAAGGA TGGAAATGGT
CAGATCCGCT GCGCCATGTT CCGCCGTGCG GCGGGCGTGC TGGATTTCAC CCCGCGCGAC
GGCGAACTGG TCGAAGTGCG CGGCCGGCTG GGCGTGTACG AGGCACGCGG CGACCTGCAG
CTCATCGTCG ACAGCCTGCA GCGCGCGGGG CAGGGGGCGC TCTTCGAGCA GTTCATGCGC
CTCAAGGCGC AACTGGAGGC CGAGGGCCTG TTCGACGCGG CGCGCAAGCG CGCGCTGCCG
GCCATGCCGC GCGGCATCGG CGTGGTCACG TCGCCGGGCG CTGCAGCACT GCATGACGTG
GTGACGGCAC TGCGCCGGCG CGTGCCGCAC ATTCCCGTGG TGCTGGTGCC GGCCCTCGTT
CAGGGGGCGC AGGCGCCGGC ATCGATTGCC GAAGCGCTAT CAAAAATGTA TCTGCTTGCG
CAGGAGGGGC GGGCGCTGGA CGGTGATTTG GCTATGAATG CCGGGGCGCC GCCAGCCATC
GACGTGATCC TGCTGGTGCG CGGCGGTGGC TCCATCGAAG ACCTGTGGGC GTTCAATGAC
GAGCGCGTGG CCCGCGCCAT CGTGCAGAGC CCGGTGCCGC TGGTCAGCGG TGTGGGGCAT
GAGACCGACT TCACCATCGC CGACTTCTGC GCCGACCTGC GCGCGCCCAC GCCCACGGCC
GCCGCCGAGT TGGTGGCACA GCCGCGTGCC GTGTGGCTGG GGGCACTCGA CCTGCTGGCG
CAACGGCTGG CCGACGGCGT ACAGCGCCAG GTGGACCTGC GGCACCAACG GCTGGACCAG
GCGGCCCAGC GGCTGGGCCG GCCCTCGGGT TTCGTGGGCC GGCAGCAATT GCGGCTGAGC
GGCCTGGAAC AGCGCCTGCG CCACGGTTTG CTATTGAAAA CGCAGCGGCT TGCGCATGCG
GGGCAAGCGC TGCAGAGTCA TTTTCCTCAA ATCGTGCAGC GCAGCCTGGT GCAGCGCAGA
GAGCGCCTGG AGCGCGCGGC GCTGCGGCTG CAACTGCTGG ATCCGCGCCT GGTGCTGCAG
CGCGGCTATG CCTTGCTGAC CGATGCGCAG GGGCAACCCG TGACGCGCCC CGCCCAGGTG
CGCCTGGGCG ACGCCGTGCA TGCCCAGTTG GCCGAGGGTG AACTGGACCT GACGGTATCG
CAGCGCCGCT TGCTGTGA
|
|---|
| Protein sequence | MFERADTGVA PRIWEVGALC RAIADALEAR FNPVAVRGEI TGFSRASSGH CYFTLKDGNG
QIRCAMFRRA AGVLDFTPRD GELVEVRGRL GVYEARGDLQ LIVDSLQRAG QGALFEQFMR
LKAQLEAEGL FDAARKRALP AMPRGIGVVT SPGAAALHDV VTALRRRVPH IPVVLVPALV
QGAQAPASIA EALSKMYLLA QEGRALDGDL AMNAGAPPAI DVILLVRGGG SIEDLWAFND
ERVARAIVQS PVPLVSGVGH ETDFTIADFC ADLRAPTPTA AAELVAQPRA VWLGALDLLA
QRLADGVQRQ VDLRHQRLDQ AAQRLGRPSG FVGRQQLRLS GLEQRLRHGL LLKTQRLAHA
GQALQSHFPQ IVQRSLVQRR ERLERAALRL QLLDPRLVLQ RGYALLTDAQ GQPVTRPAQV
RLGDAVHAQL AEGELDLTVS QRRLL
|
|---|
| |