| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2288 |
|---|
| Symbol | |
|---|
| ID | 4672086 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 2422459 |
|---|
| End bp | 2423460 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639839354 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_986526 |
|---|
| Protein GI | 121594630 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4301] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR03438] probable methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0395589 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCAG TTTCTCCCCT TGCTCGGCTT GACGGCGTCC TTCACCACCT CGGCCTGGCA
CGGCCGCAGC CGCCCGCGGG TGTGGCCTCG GCCGCCGAAC GCGGCGAGAT CCTGGCCGGC
CTGATGCAGC CGCAGGCGGC GCTCTCACCC AAGTATTTCT ACGACCAGCG GGGCTCGGAA
CTCTTCGAGG CCATCACCCG CCTGCCCGAG TACTACCCCA CGCGTACCGA GCGTGCCTTG
CTGCGGCGCC ACGGGCACGC CATTGCCCAG GCCGTAGGCC CGGCGCGTGT GGTGATCGAG
CCCGGGGCGG GCAATTGCGA CAAGGCGCGC GAGCTCTGCG CGCTGGTGCG GGCCACGCAC
TTCGTGGGCG TGGACATCTC CGCCGACTAC CTGCGGGATG CCATCGCGCG CCTGCGCGTG
GCACTGCCGG GCCTGCATGC CCGCGCCGTG GGCGCGGACA TCACCCGGGG TGTGCACCTG
CCGCCGGACG TTCCCGGTGC GCGCCGTCTC GTCTTCTACC CCGGCTCGTC CATCGGCAAC
TTCGACCCGC CCCAGGCACT GGCCCTGCTG CGGCACATGC GCGAACTGGC GCTGGACGAT
GGCGGCCTGC TGATCGGGTT CGACCTGCCC AAGGACGTGG CCGTGCTGGA GGCCGCGTAC
GACGACGCCG CCGGCGTGAC CGCGGCCTTC AACCGCAACG CGCTGGCCCA CGTGAACCGC
CTGGTCGGCA GCGACTTCGT GCCCGCGCAG TGGCGCCACC GCGCCTTCTT CAACCCCCAT
GCCTCGCGCA TCGAGATGCA CCTGGAGGCC GCGGGGCCGC AGCGCGTGTG CTGGCCGGGC
GGCGGGCGCG ACTTTGCGGC AGGCGAGCGC ATCCATACCG AGAACAGCTA CAAATACCCG
CTGCCGGATT TCACTGCGTT GCTGCACGAA GCGGGTTTCA CGCGCACGCA GGCCTGGACG
GACGATCGCG GCTGGTTCGC CATGGTGCAT GCCCAGGCGT GA
|
|---|
| Protein sequence | MSAVSPLARL DGVLHHLGLA RPQPPAGVAS AAERGEILAG LMQPQAALSP KYFYDQRGSE
LFEAITRLPE YYPTRTERAL LRRHGHAIAQ AVGPARVVIE PGAGNCDKAR ELCALVRATH
FVGVDISADY LRDAIARLRV ALPGLHARAV GADITRGVHL PPDVPGARRL VFYPGSSIGN
FDPPQALALL RHMRELALDD GGLLIGFDLP KDVAVLEAAY DDAAGVTAAF NRNALAHVNR
LVGSDFVPAQ WRHRAFFNPH ASRIEMHLEA AGPQRVCWPG GGRDFAAGER IHTENSYKYP
LPDFTALLHE AGFTRTQAWT DDRGWFAMVH AQA
|
|---|
| |