Gene Ajs_2245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2245 
Symbol 
ID4671225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2379733 
End bp2381145 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content72% 
IMG OID639839312 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_986484 
Protein GI121594588 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGC CGCTGGACGT GATCATCCTG GGCGCCGGGT CCGCCGGACT GGCGGCGCTG 
CGCGAGGTGC GCAAACGCAC CGACCACTGG CGCATCGTGA ACGACGGCCC CTGGGGCACC
ACCTGCGCGC GCGTGGGGTG CATGCCGTCC AAGATGCTCA TCGAGGCCGC CAACGCCTAC
CATGCGCGGC GCGCACTGCA CACCTTCGGC ATCGAGGGCG CGGATGCGCT GCGGGTGGAC
CTGCCCGCCG TGCTGCGCCG CGTGCGCGCG CTGCGCGATG ACTTCGTGGC CGGCACGCTG
GCCGCCACCG ACGCGGGCGA GCGCGCCATC AGCGGCCACG CCCGGCTGCT GGACGCGCAG
CGCGTGGAAG TGAACGGCCA GGTGTACACC GCGCGGCGCA TCATCATCGC CACGGGCTCG
CGCCCCATCG TGCCGGAGGA CTGGCTGGCT TTTGGTAACC GCATCCTGAC CACCGACACG
CTGTTCGAGC AGCCCACGCT CGGCCCGCGC GTGGCCGTCA TCGGGCTGGG GCCGCTGGGG
GTGGAAATCG CGCAGGCGCT CGCGCGGCTG GGGGTGGAGG TGATGGCCTT CGCGACGGGC
AAGAGCGTGG CCGGCCTGAG CGACCCCGCC ATCAACGACG CGCTGCTGGC GCGGCTGAAG
GACGAATTCA TCGTCAACGT GGGCGACAAG GCCGAGTTGC GCGAGGTGGC CGGCGGCATA
CAGGTCACCA ACGGCAGCGC GACCGGGGTG GTGGACCAGG TGGTGGCCGC CATGGGCCGG
CGCCCGAATC TGGAGCACCT GGGGCTGGAC ACGCTGGGCG TGGAGCTGGA CGACAAGGGC
CGCCCGCCCA TCGATCCGTG CACCCTGCAG GTGGGCGATC TGCCCGTCTT CATCGCGGGC
GATGCCGATG GCGACCGCCC TCTGCTGCAT GAGGCCGCGG ATGAGGGTCA CATTGCGGGG
TTGAACGCCC TGGCGCCCAC GCCGCGCGGC TTCGCCCGGC GCACGCCGCT GGCCATCACC
TTCAGCCAGC CCCATGCAGC CGTGGTGGGA CAGCGCCATG CCGATCTGCC CCAGGGGCAA
TGGGTGGTGG GCACGGTGGA CTTTGCACGC CAGGGCCGCG CGCGCGTGGC GCAGTGCAAC
CACGGGCGCC TGAACGTGTA CGCCGAGCAC GGCAGCGGCC GCCTGCTGGG CGCCGAGCTG
TGCGCGCCAG CGGGCGAACA CATGGCTCAC CTGCTGGCGC TGGCCGTCGA GCAGCGGCTG
ACGGTGCACG ACCTGCTGCG CATGCCCTTC TACCATCCGG TGCTGGAGGA AGGCCTGCGC
ACGGCGCTGC GCGACGCGGC CTCGCGCCTG CCCAAGGCCA GCGATTCCGA CCTCGCCGCC
TGCGAGGCCT ACGGCGCGAG CGCGCTGGAC TGA
 
Protein sequence
MSQPLDVIIL GAGSAGLAAL REVRKRTDHW RIVNDGPWGT TCARVGCMPS KMLIEAANAY 
HARRALHTFG IEGADALRVD LPAVLRRVRA LRDDFVAGTL AATDAGERAI SGHARLLDAQ
RVEVNGQVYT ARRIIIATGS RPIVPEDWLA FGNRILTTDT LFEQPTLGPR VAVIGLGPLG
VEIAQALARL GVEVMAFATG KSVAGLSDPA INDALLARLK DEFIVNVGDK AELREVAGGI
QVTNGSATGV VDQVVAAMGR RPNLEHLGLD TLGVELDDKG RPPIDPCTLQ VGDLPVFIAG
DADGDRPLLH EAADEGHIAG LNALAPTPRG FARRTPLAIT FSQPHAAVVG QRHADLPQGQ
WVVGTVDFAR QGRARVAQCN HGRLNVYAEH GSGRLLGAEL CAPAGEHMAH LLALAVEQRL
TVHDLLRMPF YHPVLEEGLR TALRDAASRL PKASDSDLAA CEAYGASALD