| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2219 |
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| Symbol | |
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| ID | 4673742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2354027 |
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| End bp | 2355448 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639839288 |
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| Product | RNA-directed DNA polymerase |
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| Protein accession | YP_986460 |
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| Protein GI | 121594564 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.778216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.309546 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCAG TAGGCGTCAG AGTCTCGTTG AATACCGAAA TGCAGAAATT TCTCCAAGAG
AAGACTGTGA CTCCGAGTCC CGGACAGAAT CCGAGGATGA CGGCTGACAG CGCAAAGGTA
TCGACGGCAT CTGTGACGTG GACGAACGCG GAGCCGGACA CGCTGATGGC GCGGGTGCTT
GCACCGGCCA ACCTCAGACG TGCGTATCAG CGCGTGGTCA GCAACAAGGG CGCGCCGGGT
GCCGATGGCA TGACGGTCGA CGACTTGGCG GACTACGTGA ATCAGTATTG GCCGATCCTC
CAGAGGAGGT TGCTGGCCGG CGAATACCAC CCGCAAGGTG TACGCGCCGT CGACATCCCC
AAACCCAAAG GCGGCACCCG ACAACTGGGC ATTCCCTGCG TCGTGGATCG CCTGATCCAA
CAGGCACTGC TGCAACAGCT CACGCCGATC TTCGACCCGC TGTTTTCGGA TTACAGCTAC
GGCTTCCGTC CGGGCAGAAG CGCCCACCAA GCCATCGAGA CAGCCCGCGC CCATGTGGCG
GCAGGGCATC GCTGGTGCGT GGAACTCGAT CTTGAGAAAT TCTTTGACCG GGTCAACCAC
GATCTCCTGA TGGCGTACGT GGCGCGCCAA ATCGTAGATA AACGCGTGCT CAGACTGATC
CGGCGGTACC TCCAAGCCGG TGAGATGTCG GGTGGGATCG CCAGCCGACG GCAGGAAGGG
ACGCCGCAAG GCGGCCCGCT CTCGCCGTTG CTGTCGAACA TCCTGCTCAA CGAACTCGAC
CGCGAGCTGG AACGGCGGGG TCATCGCTTC GTGCGTTATG CCGACGATGC GAACATCTAT
GTGCGCAGCC CTCGTGCTGG CGAACGAGTG ATGGCCAGTG TTGAGCGCTT CCTGAATCAG
CGCCTGAAAC TAACGCTGAA TCGGGATAAG AGCCGAGTAG CCGGGTCTTG GATGTGTGAT
TACTTGGGTT ACGGGATGAG CTGGCATCAG CAACCGAGAC TGAGAGTGGC GACGATGAGC
CTGGGTCGCT TGCGCGACCG GCTCAGAGAG CTGCTACGTA AAGCGCGGGG CCACAAGGTG
GCGACTGTCA TCGAGCGGAT AAACCCCGTG CTGCGCGGAT GGGCGGGCTA CTTCAAGCTG
AGCCAGAGCA GACGGCCACT TGAGGAATTG GACGGCTGGG TGCGTCACAA GCTTCGCTGT
ATCGTCTGGC GTCAATGGAA GCGGCCCTCT ACGAGGGCGC GCAACTTGAT ACGCTTGGGA
CTTAATGCGG CGCGGGCGTG GAAATCGGCA GTCAATGGCC GAGGCCCATG GTGGAACTCG
GGAGCGCCCC ATATGAATCA GGCGTTGCCG AAGAAGCTGT GGGACCGCCT CGGGCTGGTC
TCGATACTGG ATACGATAAA CCGACTTAAC CGTATAACCT GA
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| Protein sequence | MPPVGVRVSL NTEMQKFLQE KTVTPSPGQN PRMTADSAKV STASVTWTNA EPDTLMARVL
APANLRRAYQ RVVSNKGAPG ADGMTVDDLA DYVNQYWPIL QRRLLAGEYH PQGVRAVDIP
KPKGGTRQLG IPCVVDRLIQ QALLQQLTPI FDPLFSDYSY GFRPGRSAHQ AIETARAHVA
AGHRWCVELD LEKFFDRVNH DLLMAYVARQ IVDKRVLRLI RRYLQAGEMS GGIASRRQEG
TPQGGPLSPL LSNILLNELD RELERRGHRF VRYADDANIY VRSPRAGERV MASVERFLNQ
RLKLTLNRDK SRVAGSWMCD YLGYGMSWHQ QPRLRVATMS LGRLRDRLRE LLRKARGHKV
ATVIERINPV LRGWAGYFKL SQSRRPLEEL DGWVRHKLRC IVWRQWKRPS TRARNLIRLG
LNAARAWKSA VNGRGPWWNS GAPHMNQALP KKLWDRLGLV SILDTINRLN RIT
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