Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2218 |
Symbol | |
ID | 4673756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 2351304 |
End bp | 2353832 |
Gene Length | 2529 bp |
Protein Length | 842 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639839287 |
Product | TPR repeat-containing protein |
Protein accession | YP_986459 |
Protein GI | 121594563 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000600865 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.100568 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAAGT TCCCAAGAGC CTTTCTATCT CACGGACATG TTGACAAACA TATAGTGAGA GAAGTTGCGC GCAATCTCGG GCGCGCAGCC GTCATTTACG ACGAGTTCGA GTTTTCGGTT GGCGATGAAT TCCGTGATGC CATCATCAAA GGCATCGATC GATCAGATGT ATTTATTCTG TTTGCAAGCC GGGCCTCGCT CCAACGAGAT TGGGTTAAAT TAGAAATAGA ACTCGCTTCC GAAGCGCTCA TCAAGAATGC ACTCAGTAAG GTGACAACCT ATATCGTTGA TCAGGAGCTA ACCCACGACG ACCTTCCTGA ATGGATGCGG GCAACGCTCA TCAGGAAAGA GGCATCGCCG GGTCTGATCG CCACCGACAT CCGGCGTATC ATCAGTCAAC GTCTTGGAGA GCGCATTCCG AGATACTTTG TCGGACGTAG GGCTGAGATC GAGCAATCGC TCGAAACCAT ATCAGGCTTC ACAGATCCCA ATTTCCGCCC GCCTCTAATC GTTTACGGCC TAAAGGGTAT CGGCAGACGC TCGCTTGTCC AAGCGATTGC ACGCGACAAC CTATCCTTTG CCTCAATATT GCCAATTAAC CTCCACGCGG GCGATCTCTT GCCTGAGACA TCGATCCGCG TCGCCGAAGC GATTTCACCA GGGGGTATCT CCGACTTGGT GGCTTTTCTG AAGCAGCAAG AGCAAAAAGC GAAGGAGAAC TTGGTCGACG AGATAACCTC TCTGTTGCGT CAGGCCTGCC AAGCGGGGAC GTTGCCGATA TTTGTCGACG AAGGCGCCCT AGCCGCCGAG AATGGCGTGA TGAGACCCGA GTTCGATGCG CTGTACAACG CGATTTCGTC TGATCGGGAT ACTGACGCCA TGATCGTTTC AAGCAGGAGG CTGTATCGAC CTGCCGAAAA CCCGTGCCCG TCCGTGCGCG TCCCCGAACT TGATCAAACA TCAACGCAGA ATCTGTTGCG TATCGCCGGA CGCGACGTCG GCTTGGTATT CGATCGAACC GCGCTTACGG CAATCGCAAC CTACGCTCGT GGCTATCCTC CCGCTGTACG ATTTATTCTT GATGAGGCTC GGCTTCGCGG AATCTCGCAA GTCGTAACTG ATCAACGTGC ATTGGTGAAT TTTAATGCCG AACAGTTTCT CCGGCACTTA AGGGAGAACA GATCGCTAAC ACCGAGCATG CAGACGATCC TGCAGATCCT ATCAAGCTTC AGCCCTCTCC CACTTCAGGT CATTGTGGCG TACTGCGCGC AAACGTCACA CGATACAAGC GATGATCTGA ACTTCTTACT TGACCTCGCG TTTGTTATGC CTGCCGGAAT GCACTATCGC ATCTCAGAGC CCATCCGTGA TGCAGCATAC AGAGCATTTG GCGGACTTCG CGTCGATACC AGGAAAGTGG CCGAGCTTCT TGAAGCGTAC CTGGCAGATG AGCCTGACGA TGACGCACGA CTTGATCTCG GGCAAACGAT TTTCCGAGCC AACCTCCTTG CAGGAAGCCA GGCTGACTCT CGATTCGCGA TTGGATTTGC CGCAGATCTG ATCAACGTAG CAACTAGGAG CTATCACGAT CAAGACTACG ACCTCGCTAT CAAGTACGGT TCGTCTGCCT TGGACGTGCG GCCCGATAGC GTTGATGTAC GACGCTATGT CGCGCAAGCT CTCATTCGGA AAGAGCGATA TGATGAAGCA GAGCAGCATA TCAGCGAGCT GCTTCGCCTC GGTGAACTTA AGGAGGCGTA CTACGTGCGG GGCTTCGCCG CGCGACGGAA GCGAGAGTAT CCTGAAGCGA TCGAGGCTTA CAAGAAGAGT CTCGCCAATG GCCGCCGAGG CGTCGCCATC CACCGGGAAC TGGCAAGCTG CTTTTTTGAA ACGGGGGATC TTCCAGCCGC CGAAGAGTAT ATTCGTCAGG CCGAGCAGCA GTCTCCGCAT AACCCATATG TAGTTGATTT GAAATGCACG ATTGCGCTTA GGCTTGGCGA TCTCCCTACT GCTGAGCGCG CCCTTGAGAT CCTTGACCGC ATTGATTCAA GTGGATTCGC TGAGCATCGC CGCTCCACCT TCGAACAAGC AAACGGGAGC CCTGAGGATG CACTACGCTT CGCCCGTATC GCTGACCAAA AGATAGCCCA CCCTCCCTTT GAGGTTCTCG CCAATTTAGC GAACTGCGAG ATCGAGGCAG GAGAGTGCGA AGGCGCTTTG ACCACGCTCG GGCGACTTCA GAAACGATTT GGTGCCATCA ACCACGACGC TCAGGTTGGG CTACGGTGCA AATACGAAAT CCGATTTGGT GAGGTCGAAG CCGCTGAAGG ACTCTGGAGT CGGCTTCGCG ACACAAGTAC GCCCGTTCAC CGAGGCCTTC GTCTGGCGAT ACTGAACCGC AAGCAAGCGC AGAGTGGACT GACGGTCGAA GAAGACGCCG AACGAACTCA GCTGATCGAG TATCAATCGA CGGCAGAGCT TGAGCGTAAC ATGCGGTTAA TCGGCTCAAT GATGTCTCAA TCTGAATAA
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Protein sequence | MTKFPRAFLS HGHVDKHIVR EVARNLGRAA VIYDEFEFSV GDEFRDAIIK GIDRSDVFIL FASRASLQRD WVKLEIELAS EALIKNALSK VTTYIVDQEL THDDLPEWMR ATLIRKEASP GLIATDIRRI ISQRLGERIP RYFVGRRAEI EQSLETISGF TDPNFRPPLI VYGLKGIGRR SLVQAIARDN LSFASILPIN LHAGDLLPET SIRVAEAISP GGISDLVAFL KQQEQKAKEN LVDEITSLLR QACQAGTLPI FVDEGALAAE NGVMRPEFDA LYNAISSDRD TDAMIVSSRR LYRPAENPCP SVRVPELDQT STQNLLRIAG RDVGLVFDRT ALTAIATYAR GYPPAVRFIL DEARLRGISQ VVTDQRALVN FNAEQFLRHL RENRSLTPSM QTILQILSSF SPLPLQVIVA YCAQTSHDTS DDLNFLLDLA FVMPAGMHYR ISEPIRDAAY RAFGGLRVDT RKVAELLEAY LADEPDDDAR LDLGQTIFRA NLLAGSQADS RFAIGFAADL INVATRSYHD QDYDLAIKYG SSALDVRPDS VDVRRYVAQA LIRKERYDEA EQHISELLRL GELKEAYYVR GFAARRKREY PEAIEAYKKS LANGRRGVAI HRELASCFFE TGDLPAAEEY IRQAEQQSPH NPYVVDLKCT IALRLGDLPT AERALEILDR IDSSGFAEHR RSTFEQANGS PEDALRFARI ADQKIAHPPF EVLANLANCE IEAGECEGAL TTLGRLQKRF GAINHDAQVG LRCKYEIRFG EVEAAEGLWS RLRDTSTPVH RGLRLAILNR KQAQSGLTVE EDAERTQLIE YQSTAELERN MRLIGSMMSQ SE
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