| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2201 |
|---|
| Symbol | |
|---|
| ID | 4674480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 2330411 |
|---|
| End bp | 2331949 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639839270 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_986442 |
|---|
| Protein GI | 121594546 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00286901 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCGTTCC ATTGGCCACT GGAATTTCCA GAGGTCTTTG CGAGATCGCT CTCCGGATTC
GATGCTCTCG TCGGCAACCC GCCGTTCCTG GGCAACCGCC TCTGGAAAAG CGCAATGGGT
GACAAGCTGC AATGGCAGTG CCAGATGGTC TTGGGTGCAT CTCCGGGCAA GATCGACTTG
TGCGTGGTCT TCCATCGTCG CGCCGTCGAC CTGCTGCGAA CCGATGGCTG TTATGGGCTG
CTCGCGACCA GCAACATCGC CGAGGGTAGT GCCATCGATG TCGGCCTCGG TGTAGTGGTT
CAGAACGGCA TGATCTATTT CGCCAAGAAA GGCATGCCTT GGCCCGGCAC GGCAGCCGTG
GTGGTTGCCA TCGTTGGTTT CATCAAGGGC GAATGGCCGG CCGAATGCGA TGCCGATGGC
CGGAAGTGTG CTCGCATCGG ACCGAGGCTG GAGCCAGAAG CCTCGGATGT CTGGGCCCCA
CAAACCCTGC CGGATGCACT CTTTGCTTTC GAAGGTGTAA ACAACAGCAA AGGTCTGGCA
TTCGTCATCA CGCCGGACAG CCCCTGGTTT GAGCGACTCC AGAATGAACC GGACAGCCTG
CTCCGTCCTT ACATCACAGG TGACGACATC ACGAGCTCGG CGCTCAATCG CATCGGTCGA
TGGGCGCTGG ATATCGGTGA TCGCAGTTTG GACGAGATCG CCAGACGATG GCCGATCGCC
CATCGCTTCA TCGTCGAAGA AGTGCAACCG ACTCGCACGG TCGCCGCTCT CAAGAGTTAC
AAAGGTTTGA TCGATCGTTG GTGGCAATTC TGGAACCACC GCGCCGACCT GATGCGGCGC
ATACGGCAGC GCGGAAATTT CATCGGCTAC TCAAAGAACA CAAAGTACCC GGTTGGCATG
CTCGCTCCGT CCGATTGGAT CTACACGAAC AAGGTACTTC TGATCGGAAT GGAGCGGGAT
GACCTCTATG CCATCTCGCT AAGCACAGGC TTTCGTGCGT GGCTCGAACG ATTCAGCGGT
GGGAATCTGG GCGAGACGCT ATCGCTTTCC ATCAGCGAGT CGGTCGCCAA GTACCCAGTT
CCGAGCAGTG AAGTCTCCCG GGCGGGCATC GATGCGGCAA AGCGTTTCAA CGACTTGGCG
GTTGCATTCG GCGCTGCGCA CGAATGCGGG TTGACCGACG TCATGAACGC CATCCATACC
CCTGGCGAGG AGGATGCAAC GATCGTCGAG CTGCGGCAGT TACTGGTCGT AATCGATAAC
GAGGTGACAG CGGCCTATGG GTGGGATGAG CTGGAGATCG CCTACGATTT CCGTGAGATC
AATGGAGGCT CCGCCAATGA CCGTTGGCTA TGGTCACTGT CGCAAGACGT CACCGCCGAC
CTCCTTGGAC GGCTGACCGC ACTCAATCGT GAACGCTTCG AAGCAGCTGC GAGTAGCAGC
AGCGGCGCGT CCACAACAAC AAAGTCCAAG CGCGGACGCA GACCGAAGGC GGCCTCTCCC
GCCACCCTCG ACGGGCTGTT CGGTGAGGGA GAGCTATGA
|
|---|
| Protein sequence | MPFHWPLEFP EVFARSLSGF DALVGNPPFL GNRLWKSAMG DKLQWQCQMV LGASPGKIDL
CVVFHRRAVD LLRTDGCYGL LATSNIAEGS AIDVGLGVVV QNGMIYFAKK GMPWPGTAAV
VVAIVGFIKG EWPAECDADG RKCARIGPRL EPEASDVWAP QTLPDALFAF EGVNNSKGLA
FVITPDSPWF ERLQNEPDSL LRPYITGDDI TSSALNRIGR WALDIGDRSL DEIARRWPIA
HRFIVEEVQP TRTVAALKSY KGLIDRWWQF WNHRADLMRR IRQRGNFIGY SKNTKYPVGM
LAPSDWIYTN KVLLIGMERD DLYAISLSTG FRAWLERFSG GNLGETLSLS ISESVAKYPV
PSSEVSRAGI DAAKRFNDLA VAFGAAHECG LTDVMNAIHT PGEEDATIVE LRQLLVVIDN
EVTAAYGWDE LEIAYDFREI NGGSANDRWL WSLSQDVTAD LLGRLTALNR ERFEAAASSS
SGASTTTKSK RGRRPKAASP ATLDGLFGEG EL
|
|---|
| |