| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2196 |
|---|
| Symbol | |
|---|
| ID | 4674383 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 2321702 |
|---|
| End bp | 2322802 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639839265 |
|---|
| Product | DNA-cytosine methyltransferase |
|---|
| Protein accession | YP_986437 |
|---|
| Protein GI | 121594541 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0270] Site-specific DNA methylase |
|---|
| TIGRFAM ID | [TIGR00675] DNA-methyltransferase (dcm) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.227819 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCATGGG TTTCGCCTAC TTCGTTCAAG TATCGAAGTG GAAGCAGGAG ATTTGATGTG
ACAACGATTT CTTGTGTGGA TTTGTTCTGC GGAGCGGGCG GGCTGACGCA CGGCTTCGTG
CTGGAGGGGC TGCCCGTGGT TGCCGGTATC GATCTGGACC CGGCCTGCCG CTTTCCCTAT
GAAGCCAACA ACCAGGCCCG ATTCGTCGAA CGTGACATCA GCAAGGTCAC CGCGTCTGAA
CTGAAAGCGC TGTTCGGCGA CGCCGACTTG ACGATTCTCG CGGGCTGCGC ACCGTGCCAA
CCTTTCTCGA CCTACGCACA GCGCTACGAA CTCGACGGAA AGGATGGCAA GTGGGGCTTG
CTGTATGAGT TCGCGCGTCT CGCCAAAGGC GCCAAGCCCG ATGTCATCAC GATGGAAAAC
GTCCCTACCG TCGCGAAGCA CGAAGTGTTT CATGACTTTG TCGATACGCT GAAACGGCTC
GGCTACAACG TTTGGTTTGA TGTCGTGGAC AGCTCCCGCT ATGGCGTGCC GCAGATGCGG
CGACGCATGG TGCTGCTGGC ATCAAAACAT GGTGACATCA CGATGATCGA ACCGACCCAC
GAAAAACCGA AGACGGTTCG TCAAGCCATT GGCCGCTTGC GCCCATTGAG TGCTGGTGAA
GCGGCTCCGA GGGACAAATT GCACGTCACT TCGACGCTAT CGGAAAAGAA TCTCAAACGG
ATCAAGGTAT CGAAACCCGG TGGCACCTGG CGCGATTGGC CGGATGATCT GGTCGCCGAC
TGTCACCGCG CCGAGAGCGG ACGCACCTAC CCGGGCGTCT ACGGCCGCAT GGAGTGGGAC
AAACCCGCCC CGACCATGAC CACGCAATGC TACGGCTTTG GCAATGGCCG TTTCGGGCAC
CCAGAACAGG ACCGAGCCAT CTCGTTGAGG GAGGCAGCGA TCCTCCAGAG CTTTCCACGC
GACTACGCGT TCGTGCCGGA TGACGGCGAA GTGAGCTTCA AGGTTCTCGG GCGGCTCATC
GGCAACGCGG TTCCCGTCGA TCTCGGTCGT GCCATCGCGC GCAGCATCAA CACGCATATC
GCATCGGTCA CGGCCCGATG A
|
|---|
| Protein sequence | MPWVSPTSFK YRSGSRRFDV TTISCVDLFC GAGGLTHGFV LEGLPVVAGI DLDPACRFPY
EANNQARFVE RDISKVTASE LKALFGDADL TILAGCAPCQ PFSTYAQRYE LDGKDGKWGL
LYEFARLAKG AKPDVITMEN VPTVAKHEVF HDFVDTLKRL GYNVWFDVVD SSRYGVPQMR
RRMVLLASKH GDITMIEPTH EKPKTVRQAI GRLRPLSAGE AAPRDKLHVT STLSEKNLKR
IKVSKPGGTW RDWPDDLVAD CHRAESGRTY PGVYGRMEWD KPAPTMTTQC YGFGNGRFGH
PEQDRAISLR EAAILQSFPR DYAFVPDDGE VSFKVLGRLI GNAVPVDLGR AIARSINTHI
ASVTAR
|
|---|
| |