| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2179 |
|---|
| Symbol | |
|---|
| ID | 4673630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 2307140 |
|---|
| End bp | 2308663 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639839248 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_986420 |
|---|
| Protein GI | 121594524 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.384212 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTCT ACACCACGGA CTACTTGGAG TATTACCTGA CCCTGGTGGC TTGGGTGGTC
AACAACGGCA TCTGGAGCAT CCTCGTGGCC AGCGGCGTGT TCGCGCTGCC GTTCGTGGCC
ATCGTGATCC AGGAATGGCT CAAGGCCCGC AGCGAAGGTG CGGACGAGGG CAACAAGGGC
GTGCTGTCGT CGATGCGCAT CGAGAACCGG GTGTGGGTGG CGATCGTGGT CATCATGTTC
GCCGGCATCC CGTTCATCCC GGTGGATCTC GCCACGATCA GGTTCGACAC CACGCGCTCC
GCGCAATGCC AGGTCAGTGT CCCGCTGCCC AACGACACGG GCTGGTCCAA CGTCTACACG
GCGCTCAACG ACCAGAGCGC GCTGGTGCCG GTGTGGTGGT TCTTCATGCA CGCGCTGTCG
AAAGCCGTGA CGGGCTCCGC GGTGGCGGCG ATTCCCTGCG GCACGGACCT GCGTCAGATT
CGCATGGATG TGGATGCCAC GCGCATCGAC GATCCGGTGC TGGCACAGGA GGTCGCCGAC
TTCACGCACG ACTGCTACGG GCCGTCGCGC GCCAAGCTGT TCATGAACCG GCCGACGCTC
TCCGACGAGC AAATGAACGA CGTCACCTGG ATCGGGTCGA GTTACTTCCT CGACACGCCC
GGCTTCTATG ACACCTATCG CGCCAAGACC CCACGCACGG CCTGGCCCTA CGACGCGACC
CGCGATGCAG GGTTGGCACA GGTGGACAGC GGCGGCGGCT ATCCGTCCTG CCGGCAGTGG
TGGGCCGATG GCGGCCAGGG ACTGCGCAGC CGGCTGCTGG CACAGGTCGA CCCGGACCTA
CTGACCCGCA TCGGGCGCTG GGCGGGCTTC CTGTCGCAGA GCGAGGTCAA TGACTCGGTG
ATCCGCGCCG TGGTCTCACC GCGACAGCAG AAGATGAACC AGGGCGCCGT CTACACCGAC
TACGGTGGCC AGATCGACAA GACGCTGCCG AACGTTGTCA CGCGCGGCGC AAGCGACCTG
GGGTTGACCG TCGGCTCGCT GGCCTTCTTT CCCGCGATGG ACGTGGTGCG CCAGGCGCTG
CCGATGGTGC TGACGATGCT CAAGATGGCG CTCGTCATCT GCATCCCGCT GGTGCTGCTG
ATCGGCACCT ACGACCTGAA GACGGTGGTG ACGGTGAGCT GCGTCCAGTT CGCGCTGTTC
TTCGTGGACT TCTGGTTCCA GCTCGCGCGC TGGATCGACA GCACGATCCT GGACGCGCTC
TACGGCTGGG GGTTTGGCGC GGACAGGCCG CACACGAACT TCGATCCGTT GATCGGTTTG
AACAACGCCT TTGGCGACAT GCTCCTTAAC TTCGTCATGG CGATGATGTT CATCGTGCTA
CCGGGTTTCT GGGTAGCTGC GCTCGCGTGG GTTGGTGTCC GCGTAGGCAA CATTTCGCAG
ATGCTCTCAG CAGCCACCGA TGGCGCCAAA TCTGCGGGAG GCAAAGGCGC TGACCTTGCA
ATCAAAGCAG CGAAGGCGAA GTAG
|
|---|
| Protein sequence | MTLYTTDYLE YYLTLVAWVV NNGIWSILVA SGVFALPFVA IVIQEWLKAR SEGADEGNKG
VLSSMRIENR VWVAIVVIMF AGIPFIPVDL ATIRFDTTRS AQCQVSVPLP NDTGWSNVYT
ALNDQSALVP VWWFFMHALS KAVTGSAVAA IPCGTDLRQI RMDVDATRID DPVLAQEVAD
FTHDCYGPSR AKLFMNRPTL SDEQMNDVTW IGSSYFLDTP GFYDTYRAKT PRTAWPYDAT
RDAGLAQVDS GGGYPSCRQW WADGGQGLRS RLLAQVDPDL LTRIGRWAGF LSQSEVNDSV
IRAVVSPRQQ KMNQGAVYTD YGGQIDKTLP NVVTRGASDL GLTVGSLAFF PAMDVVRQAL
PMVLTMLKMA LVICIPLVLL IGTYDLKTVV TVSCVQFALF FVDFWFQLAR WIDSTILDAL
YGWGFGADRP HTNFDPLIGL NNAFGDMLLN FVMAMMFIVL PGFWVAALAW VGVRVGNISQ
MLSAATDGAK SAGGKGADLA IKAAKAK
|
|---|
| |