Gene Ajs_2154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2154 
Symbol 
ID4672007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2278349 
End bp2278843 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content67% 
IMG OID639839226 
Producthypothetical protein 
Protein accessionYP_986398 
Protein GI121594502 
COG category[S] Function unknown 
COG ID[COG3326] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0190416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGGCA CTGAGCGGCG CAGGGATGGC GACAAAAACC CGCGCACCAC GCAGGTGCGG 
CCCCGGTCTG CGCGCCAGCA GAACACGTCC CCTGCGGGCG CCCGCCTGGC CATGCTGCTG
ATGCTGGGCT GGCTGGCCCT GCTCGCCTGG GGTGCCTGGG CACAGCGCCT GCCACTGTGG
CTGCTGGTGG CCGTAGCGGG ACTCAATCTG GTGACTTTTT TCGCCTATGT CCTCGACAAA
AGCGCTGCCC AGCGCGGCGC CTGGCGCACC CGGGAGAGCC ACCTGCACCT GCTCGCCCTG
CTGGGCGGCT GGCCTGCCGC ATGGTGGGCC CAGCAGTGGC TGCGCCATAA ATCGCGCAAA
CAGGACTTCC GCGCGGTGTA TTGGGGCACG GTGGTGTTGA ACTGCGCCGC ACTGGCGGTG
TGGACGCTGC GGCCGCAGAC GCTGCGCGAA GTGCTTTCTT TTTTGGGGTC TCCTCGTTTT
CAGTGCAATA AGTGA
 
Protein sequence
MQGTERRRDG DKNPRTTQVR PRSARQQNTS PAGARLAMLL MLGWLALLAW GAWAQRLPLW 
LLVAVAGLNL VTFFAYVLDK SAAQRGAWRT RESHLHLLAL LGGWPAAWWA QQWLRHKSRK
QDFRAVYWGT VVLNCAALAV WTLRPQTLRE VLSFLGSPRF QCNK