| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2150 |
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| Symbol | |
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| ID | 4671767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2272136 |
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| End bp | 2274232 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639839222 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_986394 |
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| Protein GI | 121594498 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.611343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.000405507 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCATGAAG TCACCTCTGA GCCGGCCGCT GGCGCGGCGG ACGGGCAGTT CGTCCAGTTT
CCAGGTTCGC CCTTTTCGTT GTACCAGCCA TACCCGCCCG CCGGTGATCA GCCCGAGGCC
ATCGCCAAGC TGGTGGAGGG CGTGCAGGAC GGCGAGGTGT TCCAGACCCT GCTGGGGGTG
ACGGGCTCGG GCAAGACCTT CACCATGGCG AACGTGATTG CCCGCCTGGG ACGGCCGGCC
ATCATCTTCG CGCCCAACAA GACGCTGGCC GCACAGCTGT ACAGCGAGTT CCGCGAGTTC
TTCCCCAAGA ACGCCGTGGA GTACTTCGTG AGCTACTACG ACTACTACCA GCCCGAGGCC
TATGTGCCTC AGCGCGACTT GTTCATTGAG AAGGACAGCG CCATCAACGA GCACATCGAG
CAGATGCGCC TGTCGTGCAC CAAGAGCTTG CTGGAGCGGC GCGATGTGGT CATCGTGGCC
ACGGTGTCGG CCATCTACGG CATTGGCGAG CCTGAGAGCT ACCACCGCAT GATCATGACG
CTGCGCGTGG GTGACCAGCT GAGCCAGCGT GACGCGATCG CGCAGCTGAT CCGCATGCAG
TACCAGCGCA ACGAGCAGGA CTTCAGCCGG GGCAAGTTCC GCGTGCGTGG CGACACCATC
GATGTGTTCC CAGCCGAGCA TTCCGAGCTG GCGGTGCGCA TCGAACTGTT CGACGACGAG
GTGGAAAGCC TGCAGCTGTT CGACCCGCTC ACGGGGCGTA TCCAGCAAAA AATCCCGCGC
TTCACGGTGT ACCCCAGCAG CCATTACGTG ACGCCGCGCG ACAAGGTGCT GGCGGCCGTG
GAGACCATCA AGCAGGAACT GGACGAGCGG CTCAAGTTCT TCGTGGCCGA GGGCAAGTTG
GTGGAGGCGC AACGGCTGGA GCAGCGCACG CGCTTCGACC TGGAAATGCT CAGCGAAGTG
GGGCACTGCA AGGGCATCGA GAACTACACG CGCCACCTGT CGGGTTCTGC GCCTGGCGAG
CCGCCGAGCA CGCTGACCGA CTACCTCCCG CCCGATGCGC TGATGTTCCT GGATGAGAGC
CACCAGATGA TCGGGCAACT CAACGCCATG TACAACGGCG ACCGCGCGCG CAAGACCACG
CTGGTCGAGT ACGGCTTTCG CCTGCCGTCG GCATTGGACA ACCGGCCGCT CAAGTTCGAG
GAGTTCGAGC AGCGCATGCG GCAGGTGGTG TTTGTATCGG CCACTCCGGC TGATTACGAG
AAGGAGCACT CGGGCCAGGT GGTGGACCAG GTGGTGCGGC CCACCGGCTT GGTGGACCCG
GAGGTGGAGG TGCGTCCCGC TACCCATCAG GTGGATGACG TGCTGCAGGA AATACGCATT
TGCACGCAAA AGAATCAACG CGTACTCATT ACGACGCTGA CGAAGCGCAT GGCGGAGCAA
CTGACCGATT ACCTGAGCGA CAACGGGGTC AAGGTGCGCT ATCTGCACTC TGATATCGAC
ACTGTGGAGC GCGTGGAAAT CATTCGCGAC CTGCGCCTGG GAGCCTTCGA TGTCCTGGTG
GGGATCAACC TGTTGCGCGA GGGGCTGGAC ATTCCTGAGG TCTCCCTGGT GGCCATCCTG
GATGCCGACA AGGAGGGTTT CCTGCGCGCC GAACGCAGCC TGATCCAGAC CATCGGCCGG
GCGGCGCGCA ACCTGCACGG CAAGGCCATT CTGTATGCCG ACCGGATCAC CGACTCAATG
CGCAAGGCGA TCAACGAAAC GGAACGCCGC CGCGCCAAAC AAATCGCATA CAACGAGGCC
CGGGGTATTA CGCCGCGCAG CATCGTCAAG CAGGTGCGAG ACCTGATTGA CGGCGTTTAT
AGCGAGAAGG CAGGCCAGGA AGCCCAGCGA CTCCGCGAAG ATGCGGCGCG GCAGGCCGAA
TTGGAGGAGA TGTCCGAAAA GGACATTGCC CGCGAAATCA AGCGGCTGGA AAAGCTCATG
CTGGAACACG CCCGCAACCT GGAGTTTGAG CAGGCAGCTC GGGTGCGCGA TCAATTGACC
CGTCTCAAGG ACCGGGTGTT TGGAGCGCAT GGCGGCGATC AAATCCCTGC CGCATGA
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| Protein sequence | MHEVTSEPAA GAADGQFVQF PGSPFSLYQP YPPAGDQPEA IAKLVEGVQD GEVFQTLLGV
TGSGKTFTMA NVIARLGRPA IIFAPNKTLA AQLYSEFREF FPKNAVEYFV SYYDYYQPEA
YVPQRDLFIE KDSAINEHIE QMRLSCTKSL LERRDVVIVA TVSAIYGIGE PESYHRMIMT
LRVGDQLSQR DAIAQLIRMQ YQRNEQDFSR GKFRVRGDTI DVFPAEHSEL AVRIELFDDE
VESLQLFDPL TGRIQQKIPR FTVYPSSHYV TPRDKVLAAV ETIKQELDER LKFFVAEGKL
VEAQRLEQRT RFDLEMLSEV GHCKGIENYT RHLSGSAPGE PPSTLTDYLP PDALMFLDES
HQMIGQLNAM YNGDRARKTT LVEYGFRLPS ALDNRPLKFE EFEQRMRQVV FVSATPADYE
KEHSGQVVDQ VVRPTGLVDP EVEVRPATHQ VDDVLQEIRI CTQKNQRVLI TTLTKRMAEQ
LTDYLSDNGV KVRYLHSDID TVERVEIIRD LRLGAFDVLV GINLLREGLD IPEVSLVAIL
DADKEGFLRA ERSLIQTIGR AARNLHGKAI LYADRITDSM RKAINETERR RAKQIAYNEA
RGITPRSIVK QVRDLIDGVY SEKAGQEAQR LREDAARQAE LEEMSEKDIA REIKRLEKLM
LEHARNLEFE QAARVRDQLT RLKDRVFGAH GGDQIPAA
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