Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2144 |
Symbol | |
ID | 4671438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 2265813 |
End bp | 2267033 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639839217 |
Product | cysteine desulfurase IscS |
Protein accession | YP_986389 |
Protein GI | 121594493 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS [TIGR03402] cysteine desulfurase NifS |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00124025 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGACATGA CTCCGCATTT CCCTATCTAT CTTGACTACG GCGCCACGAC CCCCGTGGAC GGACGGGTCG TCGACGCGAT GATTCCCTGG TTGCGCGAAC ACTTCGGCAA CCCGGCGTCG CGCAGCCACG CCTGGGGCTG GGAGGCCGAA GAGGCCGTGG AGCAAGCCCG CGGCCATGTG GCCGATCTGA TCGGCGCCGA CTCGCGCGAG ATCGTGTGGA CCTCGGGCGC CACTGAATCC AACAACCTCG CCATCAAGGG CGCTGCCCAT TTCTACCAAG GCAAGGGCAA GCATCTCATC ACCGTGAAGA CGGAGCACAA GGCCGTCCTT GACGTGATGC GTGAACTGGA GCGCCAAGGC TTCGAGGTGA CCTACCTTGA TGTGCAGGAG AACGGCCTGC TCGACATCGA GGAGTTCAAG GCCGCCATCC GCCCTGACAC GATCCTGGCC AGTGTCATGT TCGTGAACAA CGAAATCGGC GTGATCCAGG ACATTCCCCA GCTGGGTGCG CTTTGCCGCG AGAAGGGCAT CATTTTTCAC GTGGATGCCG CGCAGGCCAC CGGCAAGGTC GAAATCGACC TGACCCAATT GCCCGTGGAT TTGATGAGCC TGGCTTCGCA CAAGACTTAC GGACCCAAGG GCATCGGAGC CCTCTACGTG CGCCGCAAGC CGCGCGTGCG CCTGGAAGCG CAGATGCATG GTGGCGGCCA CGAGCGCGGC ATGCGTTCGG GCACGTTGCC CACCCACCAG ATTGTGGGCA TGGGCGAGGC CTTCCGCCTG GCCAAGCTGG AAATGGCCCA GGATTTGGAA AAGGTCCAAG CGCTGCAAAA GCGTCTGCTG GACGGTCTGA AGGATGTGGA GCAGGTCTTT ATCAACGGCG ACCTGGAGCG GCGCGTACCC CACAACCTGA ACATGAGCTT CAACTTCGTG GAAGGCGAAT CCCTGATCAT GGGCATCAAG GGACTGGCGG TGTCTTCCGG GTCGGCTTGC ACTTCGGCGA GCCTGGAACC CAGCTATGTG CTGCGCGCCC TGGGCCGCAG CGATGAGCTG GCACACAGCA GCCTGCGCAT GACCATTGGC CGCTTCACGA CGGAAGAAGA AATTGACTAC GCGATCAGCA CCATCCGGCA CAACGTCGCC AAGCTGCGTG AGTTGAGCCC CCTCTGGGAG ATGTACCAGG ATGGGGTGGA CCTGAGCACC ATCCAATGGG CGGCTCACTG A
|
Protein sequence | MDMTPHFPIY LDYGATTPVD GRVVDAMIPW LREHFGNPAS RSHAWGWEAE EAVEQARGHV ADLIGADSRE IVWTSGATES NNLAIKGAAH FYQGKGKHLI TVKTEHKAVL DVMRELERQG FEVTYLDVQE NGLLDIEEFK AAIRPDTILA SVMFVNNEIG VIQDIPQLGA LCREKGIIFH VDAAQATGKV EIDLTQLPVD LMSLASHKTY GPKGIGALYV RRKPRVRLEA QMHGGGHERG MRSGTLPTHQ IVGMGEAFRL AKLEMAQDLE KVQALQKRLL DGLKDVEQVF INGDLERRVP HNLNMSFNFV EGESLIMGIK GLAVSSGSAC TSASLEPSYV LRALGRSDEL AHSSLRMTIG RFTTEEEIDY AISTIRHNVA KLRELSPLWE MYQDGVDLST IQWAAH
|
| |