Gene Ajs_2144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2144 
Symbol 
ID4671438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2265813 
End bp2267033 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content62% 
IMG OID639839217 
Productcysteine desulfurase IscS 
Protein accessionYP_986389 
Protein GI121594493 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 
TIGRFAM ID[TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00124025 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACATGA CTCCGCATTT CCCTATCTAT CTTGACTACG GCGCCACGAC CCCCGTGGAC 
GGACGGGTCG TCGACGCGAT GATTCCCTGG TTGCGCGAAC ACTTCGGCAA CCCGGCGTCG
CGCAGCCACG CCTGGGGCTG GGAGGCCGAA GAGGCCGTGG AGCAAGCCCG CGGCCATGTG
GCCGATCTGA TCGGCGCCGA CTCGCGCGAG ATCGTGTGGA CCTCGGGCGC CACTGAATCC
AACAACCTCG CCATCAAGGG CGCTGCCCAT TTCTACCAAG GCAAGGGCAA GCATCTCATC
ACCGTGAAGA CGGAGCACAA GGCCGTCCTT GACGTGATGC GTGAACTGGA GCGCCAAGGC
TTCGAGGTGA CCTACCTTGA TGTGCAGGAG AACGGCCTGC TCGACATCGA GGAGTTCAAG
GCCGCCATCC GCCCTGACAC GATCCTGGCC AGTGTCATGT TCGTGAACAA CGAAATCGGC
GTGATCCAGG ACATTCCCCA GCTGGGTGCG CTTTGCCGCG AGAAGGGCAT CATTTTTCAC
GTGGATGCCG CGCAGGCCAC CGGCAAGGTC GAAATCGACC TGACCCAATT GCCCGTGGAT
TTGATGAGCC TGGCTTCGCA CAAGACTTAC GGACCCAAGG GCATCGGAGC CCTCTACGTG
CGCCGCAAGC CGCGCGTGCG CCTGGAAGCG CAGATGCATG GTGGCGGCCA CGAGCGCGGC
ATGCGTTCGG GCACGTTGCC CACCCACCAG ATTGTGGGCA TGGGCGAGGC CTTCCGCCTG
GCCAAGCTGG AAATGGCCCA GGATTTGGAA AAGGTCCAAG CGCTGCAAAA GCGTCTGCTG
GACGGTCTGA AGGATGTGGA GCAGGTCTTT ATCAACGGCG ACCTGGAGCG GCGCGTACCC
CACAACCTGA ACATGAGCTT CAACTTCGTG GAAGGCGAAT CCCTGATCAT GGGCATCAAG
GGACTGGCGG TGTCTTCCGG GTCGGCTTGC ACTTCGGCGA GCCTGGAACC CAGCTATGTG
CTGCGCGCCC TGGGCCGCAG CGATGAGCTG GCACACAGCA GCCTGCGCAT GACCATTGGC
CGCTTCACGA CGGAAGAAGA AATTGACTAC GCGATCAGCA CCATCCGGCA CAACGTCGCC
AAGCTGCGTG AGTTGAGCCC CCTCTGGGAG ATGTACCAGG ATGGGGTGGA CCTGAGCACC
ATCCAATGGG CGGCTCACTG A
 
Protein sequence
MDMTPHFPIY LDYGATTPVD GRVVDAMIPW LREHFGNPAS RSHAWGWEAE EAVEQARGHV 
ADLIGADSRE IVWTSGATES NNLAIKGAAH FYQGKGKHLI TVKTEHKAVL DVMRELERQG
FEVTYLDVQE NGLLDIEEFK AAIRPDTILA SVMFVNNEIG VIQDIPQLGA LCREKGIIFH
VDAAQATGKV EIDLTQLPVD LMSLASHKTY GPKGIGALYV RRKPRVRLEA QMHGGGHERG
MRSGTLPTHQ IVGMGEAFRL AKLEMAQDLE KVQALQKRLL DGLKDVEQVF INGDLERRVP
HNLNMSFNFV EGESLIMGIK GLAVSSGSAC TSASLEPSYV LRALGRSDEL AHSSLRMTIG
RFTTEEEIDY AISTIRHNVA KLRELSPLWE MYQDGVDLST IQWAAH