Gene Ajs_2143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2143 
Symbol 
ID4671600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2265374 
End bp2265775 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content62% 
IMG OID639839216 
ProductFeS cluster assembly scaffold IscU 
Protein accessionYP_986388 
Protein GI121594492 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR01999] FeS cluster assembly scaffold IscU 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00760622 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTTACT CGGACAAAGT GATTGACCAT TACGAGAACC CCCGCAATGT GGGTTCCTTC 
GACAAGGGTG ACGACTCGGT GGGCACCGGC ATGGTCGGTG CGCCGGCTTG CGGCGACGTG
ATGAAGCTGC AGATCAAGGT GAACCCCGAT ACGGGCGTGA TTGAGGATGC GCGCTTCAAG
ACCTACGGCT GCGGCTCCGC CATTGCGTCC TCGTCGCTGG TGACGGAATG GGTCAAGGGC
AAGACGCTGG ATGAGGCTGC CTCGCTCAAG AACAGCCAGA TCGCCGAAGA GCTGGCGCTG
CCGCCGGTGA AGATCCACTG CTCCATCCTG GCGGAAGACG CCATCAAGGC CGCCGTCAAC
GATTACAAGG CCAAGCACGG AGCGGCTGTC GAGGCCGCCT GA
 
Protein sequence
MAYSDKVIDH YENPRNVGSF DKGDDSVGTG MVGAPACGDV MKLQIKVNPD TGVIEDARFK 
TYGCGSAIAS SSLVTEWVKG KTLDEAASLK NSQIAEELAL PPVKIHCSIL AEDAIKAAVN
DYKAKHGAAV EAA