| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2136 |
|---|
| Symbol | |
|---|
| ID | 4670732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 2258921 |
|---|
| End bp | 2260036 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639839207 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_986381 |
|---|
| Protein GI | 121594485 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0579] Predicted dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.471962 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0129365 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGA CGGTCGATTG CGTCGTGGTG GGCGCGGGGG TGGTGGGGCT GGCGGTGGCG
CGCGCATTGG CGCTGCAAGG GCGCGAGGTC TGGCTGCTGG AAGCGGCCAA TGCCATTGGC
ACCGAGACGA GTTCGCGCAA CAGCGAGGTG ATCCACGCCG GTATCTATTA CCCGCAGGGT
TCGCTCAAGG CGCGCTTGTG CGTACAAGGC AAGGCCATGC TGTACGACTA CTGCAGCGAG
CGCGGCGTGC CCCATAGTCG CTGCGGCAAG CTCATCGTCG CCACGTCGAC CGAACAGCAG
AACGCGCTGA CGGGCATCAG GGCGCGCGCG CAGGCCAATG GCGTGGATGA CCTGCAATGG
CTCTCGCGGG AGGAAGCGCG TGCGCTGGAG CCCGAACTGG AATGTGTGGC AGCGCTGCTC
TCGCCCAGTA CCGGCATCGT GGACAGCCAT GCCCTCATGC TGGCGTTGCT GGGCGACCTG
GAGAACGCGG GTGGTGTTCT GGCATTGAAT TCGCCTCTGG CCAAGGCCCG TTGCACGCCA
CAAGCTATCC ATTTGGAAGC AATGGATGGC ACGTGCATCA GTGCGCGCAC CGTGGTCAAC
GCGGCCGGTT TGCATGCGCC AGTCCTCGCG CGCCAGTTCG AGGGGTTGTC CGCGGTGCAT
GTACCGCAGG CGGCCTATGC CAAAGGCAAC TATTTCACGT TGTCCGGCCG GGCACCCTTC
AGCCATCTCA TCTATCCCGT ACCGGAGGCG GCGGGGCTGG GCGTGCACCT GACGCTCGAC
CTGGGGGGGC AGGCCAAGTT CGGCCCCGAC GTGCAATGGG TGGAAGGCCC CGAGGACCTG
GTGGTGGATG CGAGCCGCTC CGAGGCCTTT TACGCCGAGG TGCGCAAGTA CTGGCCTGGC
CTGCGCGACG GTGCACTGGC GGCGGGCTAC GCCGGCATAC GCCCGAAGAT CCACGGCCCC
CATGAGCCCG CGGCGGACTT CCTGATCCAG GGGCCGCGCG ATCACGGAGT CTCGGGGCTG
GTCAACCTGT TTGGCATCGA ATCACCTGGG CTGACCAGCG CGTTGGCAAT CGGTGCGCAC
GTGGCCGGTC TGCTGCACCA AGACGCCGTG TCTTGA
|
|---|
| Protein sequence | MSETVDCVVV GAGVVGLAVA RALALQGREV WLLEAANAIG TETSSRNSEV IHAGIYYPQG
SLKARLCVQG KAMLYDYCSE RGVPHSRCGK LIVATSTEQQ NALTGIRARA QANGVDDLQW
LSREEARALE PELECVAALL SPSTGIVDSH ALMLALLGDL ENAGGVLALN SPLAKARCTP
QAIHLEAMDG TCISARTVVN AAGLHAPVLA RQFEGLSAVH VPQAAYAKGN YFTLSGRAPF
SHLIYPVPEA AGLGVHLTLD LGGQAKFGPD VQWVEGPEDL VVDASRSEAF YAEVRKYWPG
LRDGALAAGY AGIRPKIHGP HEPAADFLIQ GPRDHGVSGL VNLFGIESPG LTSALAIGAH
VAGLLHQDAV S
|
|---|
| |