Gene Ajs_2125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2125 
SymbolaceE 
ID4670861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2245956 
End bp2248652 
Gene Length2697 bp 
Protein Length898 aa 
Translation table11 
GC content65% 
IMG OID639839196 
Productpyruvate dehydrogenase subunit E1 
Protein accessionYP_986370 
Protein GI121594474 
COG category[C] Energy production and conversion 
COG ID[COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component 
TIGRFAM ID[TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0558604 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATC CGACCAAAGT CCTGACCGCT ACCGACATCG ACCAACAGGA AACCCGCGAA 
TGGCTGGACG CGCTGTCGGC AGTGATCGAC AAGGAGGGGC CGGAGCGTGC CCACTTCCTG
CTGGAGCAAT TGCTGGAGCA GGCGCGCCAG AGCAGTATTG ACCTGCCGTT CTCCGCCAAT
ACGGGATACG TGAACACCAT CGAGCCGGAC CAGGAGGCCC GCTGCCCCGG CAATATCGCC
ATCGAGAAGC GCCTGCGCGC CTACATGCGC TGGAACGCCA TGGCCATGGT GGTGCGCGCC
AACCGCCTGC ATCCGCATGA CGGCGGCGAC CTGGGCGGCC ACATCGGCTC CTTCGCTTCG
CTGGCCTCCA TGTGGGGCGC GGGCTTCAAC CACTTCTGGC ATGCCGAGAG CGAAGGCCAC
GGCGGCGACT GCATCTACTT CCAGGGCCAC AGCGCGCCCG GCATCTATGC CCGCGCCTAC
CTCGAAGGCC GCATCACCGA AGACCAGCTG GAAAACTTCC GCCAGGAGAC CGGCGGCAAG
GGCTTGTCGA GCTACCCGCA CCCCAAGCTG ATGCCGGGCT TCTGGCAGTT CCCCACGGTG
TCCATGGGCC TGGGGCCGAT GATGGCCATC TACCAGGCGC GCTTTCTCAA GTATCTGGAT
GCGCGTGGCA TCGCCGACAC CAAGAACCGC AAGGTCTGGG TATTCCTGGG CGACGGCGAG
ATGGATGAGC CCGAGAGCAA GGGCGCGATC AGCCTGGCCG CGCGTGAAAA CCTGGACAAC
CTGATCTTCG TTATCAACTG CAACCTGCAG CGCCTGGACG GCCCGGTGCG CGGCAACGGC
AAGATCATTC AAGAGTTGGA AGGCGGCTTC CGCGGTGCGG GCTGGCATGT CATCAAGCTG
CTGTGGGGCA AGGGCTGGGA CGAGCTGCTG GCACGCGACA AGAGCGGCAA GCTCAAGCAG
CTGATGATGG AGACGCTGGA CGGCGACTAC CAGACCTACC GCGCCATGGA CGGCGCGTAT
ATCCGCAAGC ATTTCTTCGG CAGGTACCCC GAGACGGCCA AGCTCGTGGA GCACATGAGC
GACGACGAGA TCTGGGAACT GCGCCGCGGC GGCCACGACC CCGAGAAGGT GTACGCCGCC
TTCCATGCGG CCAATGAACA CCAGGGTCAG CCCACGGTGT TGCTGGTCAA GACCGTCAAG
GGTTACGGCA TGGGCAAGGC CGGTGAGGGC AAGAACACCG TGCACCAGAC CAAGAAGCTG
TCGGACGAGG ACATCAAGTA CATCCGCGAC CGCTTCAACA TCCCGATCCC CGACAGCGAG
CTGGACAAGC TGCCCTACTA CAAGCCGGCC GACGACACGC CGGAAATGAA GTACCTGCAC
GAGCGTCGCA AGGCCCTGGG CGGCTACCTG CCGCAGCGTC GCACGCACGC CGACGAGAGT
TTCACCGTGC CGGCGCTGGA GACGTTCAAG GCCGTGCTGG AGCCCACCGC CGAGGGCCGC
GAGATCTCCA CCACCCAGGC CTACGTGCGC TTTCTCACGC AGCTGCTGCG CGACAAGGCC
CTGGGTCCGC GCGTGGTGCC CATCCTGGTG GATGAGGCGC GTACCTTCGG CATGGAGGGG
TTGTTCCGCC AGATTGGCAT CTACAACCCC GAGGGCCAGC TCTACACCCC GGTCGACCGC
GACCAGGTGA TGTACTACAA GGAAGACAAG GCCGGTCAGA TTCTTCAGGA GGGCATCAAC
GAGGCGGGCG GCATGTGCTC GTGGATCGCT GCGGCGACGT CGTATTCGAC GAACAATCGC
ATCATGATCC CGTTCTACGT GTACTACTCG ATGTTCGGCT TCCAGCGCTT TGGCGACTTC
GCCTGGGCCG CGGGCGACAT GCAGGCGCGC GGCTTCATCC TGGGGGGCAC GTCGGGCCGC
ACCACGCTTA ACGGCGAAGG CCTGCAGCAC CAGGACGGCC ACAGCCACAT CCTGGCCAAC
ACCATTCCCA ACTGCGTGAG CTACGACCCG ACCTTCGCGC ACGAGGTGGC GGTCATCATG
CAGGACGGCC TGAAGCGCAT GGTGGAGAAG CAGGAAAACG TCTACTACTA CATCACGCTG
CTCAACGAGA ACTACGCCAT GCCGGGCCTG CAGCCGGGCA CGGAAGAGCA GATCATCCAG
GGCATGTACC TGTGCAAGGC CGGCGCGGAC GGCGACAAGC GCGTGCAGCT GCTGGGTTCG
GGCTCGATCC TGCGCGAGTC GATCGAGGCG CAGAAGCTGC TCGCCGCCGA CTGGGGCGTG
CAGGCCGACG TGTGGAGCTG CACCAGCTTC AACGAGCTGA CCCGCGAGGG CCAGGACGTG
GCGCGCTGGA ACCTGCTGCA TCCGCTGGAG ACACCGCGCG TGTCCTTCGT GGCGCAGCAG
CTGGGCGGCC GCCCGGGCCC CGTGGTGGCG TCCACCGACT ACATGAAGAA CTACGCCGAG
CAGATCCGCG CCTTCATCCC CGCAGGGCGC TCCTACACCG TGCTGGGTAC CGACGGCTTT
GGCCGCAGCG ACTTCCGCTA CCGCCTGCGC GAGCACTTCG AGGTCAACCG CCACTACATC
ACCGTGGCCG CGCTGAGCGC ACTGGCCGAC GAGGGCAAGC TGCCCAAGGC GAAGGTGGCC
GAGGCGATTG CCAAGTACGG CATCCAGACC GAGAAGATCA ACCCCTTGCA CGCCTGA
 
Protein sequence
MSDPTKVLTA TDIDQQETRE WLDALSAVID KEGPERAHFL LEQLLEQARQ SSIDLPFSAN 
TGYVNTIEPD QEARCPGNIA IEKRLRAYMR WNAMAMVVRA NRLHPHDGGD LGGHIGSFAS
LASMWGAGFN HFWHAESEGH GGDCIYFQGH SAPGIYARAY LEGRITEDQL ENFRQETGGK
GLSSYPHPKL MPGFWQFPTV SMGLGPMMAI YQARFLKYLD ARGIADTKNR KVWVFLGDGE
MDEPESKGAI SLAARENLDN LIFVINCNLQ RLDGPVRGNG KIIQELEGGF RGAGWHVIKL
LWGKGWDELL ARDKSGKLKQ LMMETLDGDY QTYRAMDGAY IRKHFFGRYP ETAKLVEHMS
DDEIWELRRG GHDPEKVYAA FHAANEHQGQ PTVLLVKTVK GYGMGKAGEG KNTVHQTKKL
SDEDIKYIRD RFNIPIPDSE LDKLPYYKPA DDTPEMKYLH ERRKALGGYL PQRRTHADES
FTVPALETFK AVLEPTAEGR EISTTQAYVR FLTQLLRDKA LGPRVVPILV DEARTFGMEG
LFRQIGIYNP EGQLYTPVDR DQVMYYKEDK AGQILQEGIN EAGGMCSWIA AATSYSTNNR
IMIPFYVYYS MFGFQRFGDF AWAAGDMQAR GFILGGTSGR TTLNGEGLQH QDGHSHILAN
TIPNCVSYDP TFAHEVAVIM QDGLKRMVEK QENVYYYITL LNENYAMPGL QPGTEEQIIQ
GMYLCKAGAD GDKRVQLLGS GSILRESIEA QKLLAADWGV QADVWSCTSF NELTREGQDV
ARWNLLHPLE TPRVSFVAQQ LGGRPGPVVA STDYMKNYAE QIRAFIPAGR SYTVLGTDGF
GRSDFRYRLR EHFEVNRHYI TVAALSALAD EGKLPKAKVA EAIAKYGIQT EKINPLHA