Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2123 |
Symbol | |
ID | 4671634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 2242333 |
End bp | 2244216 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639839194 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_986368 |
Protein GI | 121594472 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATCA TCGACATCAA GGTGCCCGAC ATCGGCGACT TCGCCGAGGT GGGCGTGATC GAAGTGCTGG TGCAGCCGGG CGACACCATC CGGGCCGAGC AGAGCCTGGT CACCGTGGAG TCCGACAAGG CCTCCATGGA GATTCCCAGC AGCCACGCCG GGGTGGTCAA GGAGCTCAAG GTCAAGTTGG GCGACAAGGT GGCCGAGGGT TCCGTGCTGC TGACGCTGGA AGTGGCGCAG GGAGCGGCGG CGCCGGCTGC GGCCCCTGCC GCGGCGAGCA CGCCCAGCGC ACCGCCATCT GAGTCAAAAC CGGCTCCAGC GCCCGCTGTT CAAGCGCCAG CAGCTCCTAA AACAGAAGCA TCCAGCTTCG GCGGCAGTGC CGACGTGGAG TGCGATGTGC TGGTGCTGGG CGGCGGCCCC GGCGGTTACA GCGCCGCCTT CCGCGCCGCC GACCTGGGCC TGAACGTGGT GCTGGTCGAG CGCTACGCCA CCCTGGGCGG CGTGTGCCTG AACGTGGGCT GCATTCCCTC CAAGGCGCTG CTGCACGTGG CCGCGGTGAT GGACGAAGTG AGCCACCTGA AGAGCGCCGG CATCGACTTC GGCGCGCCGC AGGTCAACAT CCACACCCTG CGCGGCCACA AGGAAAAGGT CATCGGCAAG CTGACCGGCG GGCTGGCGCA GATGGCCAAG ATGCGCAAGG TGACCGTGCT GCGCGGCTAC GGCCACTTCG TCGGCGCCAA CCACCTGGAG GTGGAGGAAA CCACCGGCAC CAGCCAGGAC AAGACCGGCG CCAAGAAGGT GGTGGCGTTC AAGCGCGCCA TCATCGCCGC CGGCAGCCAG GCCGTGCGCC TGCCGTTCAT GCCCGACGAT CCGCGCGTGG TGGATTCCAC CGGTGCGCTG GCGCTCAAGG ACGTGCCCAA ACGCATGCTG ATCCTGGGCG GCGGCATCAT CGGCCTGGAA ATGGGCACGG TGTACAGCAC GCTGGGCGCG CGCCTGGACG TGGTGGAGAT GCTGGACGGC CTGATGCAGG GCGCTGATCG CGACCTGGTC AAGGTATGGC AGAAGATGAA CCAGCACCGT TTCGACAACG TGATGCTGAA TACCAAGACC GTGGCCGCCG AGGCCACGCC CGAGGGCATC AAGGTGAGCT TCGCGCCCGC CAAGGACGGC GTCACGGTGC CCGAGCCCCA GGTGTACGAC CTGGTGCTGC AGGCCGTGGG CCGCACCCCC AACGGCAAGA AGATCGCCGC TGACAAGGCC GGTGTTGCCG TGACGGACCG CGGCTTCATC AACGTCGACA TCCAGATGCG CACCAACGTG CCGCACATCT TCGCCATCGG CGACATCGTG GGCCAGCCCA TGCTGGCGCA CAAGGCGGTG CATGAAGCGC ACGTGGCGGC CGAGGTCATC GCCGGCGAAC TGCAGGGCAA CAAGGAACTG GCAAGCGCCG CCTTCAACGC CCGCGTGATC CCGAGCGTGG CCTATACCGA CCCCGAAGTG GCCTGGGTGG GCCTGACCGA GGACCAGGCC AAGGCGCAGG GCATCAAGGT CAAGAAAGGC CTGTTCCCCT GGGCGGCCAG CGGCCGCGCC ATCGCCAACG GGCGCGACGA AGGCTTTACC AAGCTGCTGT TCGACGACAG CCCCGAAGCA GGATCAGGAG ACGGCCATGC TGGCCGGGGC CACGGCAAGA TCCTGGGCGG CGGCATGGTC GGCACGCATG CGGGCGACAT GATCGGCGAG ATCGCCCTGG CCATCGAGAT GGGTGCGGAC GCTGTCGACA TCGGCAAGAC CATCCACCCG CATCCGACGC TGGGCGAGAG CATCGGCATG GCGGCGGAAG TGGCGCATGG CAGCTGCACG GATGTGCCGC CTGCGCGCAA GTAA
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Protein sequence | MAIIDIKVPD IGDFAEVGVI EVLVQPGDTI RAEQSLVTVE SDKASMEIPS SHAGVVKELK VKLGDKVAEG SVLLTLEVAQ GAAAPAAAPA AASTPSAPPS ESKPAPAPAV QAPAAPKTEA SSFGGSADVE CDVLVLGGGP GGYSAAFRAA DLGLNVVLVE RYATLGGVCL NVGCIPSKAL LHVAAVMDEV SHLKSAGIDF GAPQVNIHTL RGHKEKVIGK LTGGLAQMAK MRKVTVLRGY GHFVGANHLE VEETTGTSQD KTGAKKVVAF KRAIIAAGSQ AVRLPFMPDD PRVVDSTGAL ALKDVPKRML ILGGGIIGLE MGTVYSTLGA RLDVVEMLDG LMQGADRDLV KVWQKMNQHR FDNVMLNTKT VAAEATPEGI KVSFAPAKDG VTVPEPQVYD LVLQAVGRTP NGKKIAADKA GVAVTDRGFI NVDIQMRTNV PHIFAIGDIV GQPMLAHKAV HEAHVAAEVI AGELQGNKEL ASAAFNARVI PSVAYTDPEV AWVGLTEDQA KAQGIKVKKG LFPWAASGRA IANGRDEGFT KLLFDDSPEA GSGDGHAGRG HGKILGGGMV GTHAGDMIGE IALAIEMGAD AVDIGKTIHP HPTLGESIGM AAEVAHGSCT DVPPARK
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