Gene Ajs_2123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2123 
Symbol 
ID4671634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2242333 
End bp2244216 
Gene Length1884 bp 
Protein Length627 aa 
Translation table11 
GC content68% 
IMG OID639839194 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_986368 
Protein GI121594472 
COG category[C] Energy production and conversion 
COG ID[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATCA TCGACATCAA GGTGCCCGAC ATCGGCGACT TCGCCGAGGT GGGCGTGATC 
GAAGTGCTGG TGCAGCCGGG CGACACCATC CGGGCCGAGC AGAGCCTGGT CACCGTGGAG
TCCGACAAGG CCTCCATGGA GATTCCCAGC AGCCACGCCG GGGTGGTCAA GGAGCTCAAG
GTCAAGTTGG GCGACAAGGT GGCCGAGGGT TCCGTGCTGC TGACGCTGGA AGTGGCGCAG
GGAGCGGCGG CGCCGGCTGC GGCCCCTGCC GCGGCGAGCA CGCCCAGCGC ACCGCCATCT
GAGTCAAAAC CGGCTCCAGC GCCCGCTGTT CAAGCGCCAG CAGCTCCTAA AACAGAAGCA
TCCAGCTTCG GCGGCAGTGC CGACGTGGAG TGCGATGTGC TGGTGCTGGG CGGCGGCCCC
GGCGGTTACA GCGCCGCCTT CCGCGCCGCC GACCTGGGCC TGAACGTGGT GCTGGTCGAG
CGCTACGCCA CCCTGGGCGG CGTGTGCCTG AACGTGGGCT GCATTCCCTC CAAGGCGCTG
CTGCACGTGG CCGCGGTGAT GGACGAAGTG AGCCACCTGA AGAGCGCCGG CATCGACTTC
GGCGCGCCGC AGGTCAACAT CCACACCCTG CGCGGCCACA AGGAAAAGGT CATCGGCAAG
CTGACCGGCG GGCTGGCGCA GATGGCCAAG ATGCGCAAGG TGACCGTGCT GCGCGGCTAC
GGCCACTTCG TCGGCGCCAA CCACCTGGAG GTGGAGGAAA CCACCGGCAC CAGCCAGGAC
AAGACCGGCG CCAAGAAGGT GGTGGCGTTC AAGCGCGCCA TCATCGCCGC CGGCAGCCAG
GCCGTGCGCC TGCCGTTCAT GCCCGACGAT CCGCGCGTGG TGGATTCCAC CGGTGCGCTG
GCGCTCAAGG ACGTGCCCAA ACGCATGCTG ATCCTGGGCG GCGGCATCAT CGGCCTGGAA
ATGGGCACGG TGTACAGCAC GCTGGGCGCG CGCCTGGACG TGGTGGAGAT GCTGGACGGC
CTGATGCAGG GCGCTGATCG CGACCTGGTC AAGGTATGGC AGAAGATGAA CCAGCACCGT
TTCGACAACG TGATGCTGAA TACCAAGACC GTGGCCGCCG AGGCCACGCC CGAGGGCATC
AAGGTGAGCT TCGCGCCCGC CAAGGACGGC GTCACGGTGC CCGAGCCCCA GGTGTACGAC
CTGGTGCTGC AGGCCGTGGG CCGCACCCCC AACGGCAAGA AGATCGCCGC TGACAAGGCC
GGTGTTGCCG TGACGGACCG CGGCTTCATC AACGTCGACA TCCAGATGCG CACCAACGTG
CCGCACATCT TCGCCATCGG CGACATCGTG GGCCAGCCCA TGCTGGCGCA CAAGGCGGTG
CATGAAGCGC ACGTGGCGGC CGAGGTCATC GCCGGCGAAC TGCAGGGCAA CAAGGAACTG
GCAAGCGCCG CCTTCAACGC CCGCGTGATC CCGAGCGTGG CCTATACCGA CCCCGAAGTG
GCCTGGGTGG GCCTGACCGA GGACCAGGCC AAGGCGCAGG GCATCAAGGT CAAGAAAGGC
CTGTTCCCCT GGGCGGCCAG CGGCCGCGCC ATCGCCAACG GGCGCGACGA AGGCTTTACC
AAGCTGCTGT TCGACGACAG CCCCGAAGCA GGATCAGGAG ACGGCCATGC TGGCCGGGGC
CACGGCAAGA TCCTGGGCGG CGGCATGGTC GGCACGCATG CGGGCGACAT GATCGGCGAG
ATCGCCCTGG CCATCGAGAT GGGTGCGGAC GCTGTCGACA TCGGCAAGAC CATCCACCCG
CATCCGACGC TGGGCGAGAG CATCGGCATG GCGGCGGAAG TGGCGCATGG CAGCTGCACG
GATGTGCCGC CTGCGCGCAA GTAA
 
Protein sequence
MAIIDIKVPD IGDFAEVGVI EVLVQPGDTI RAEQSLVTVE SDKASMEIPS SHAGVVKELK 
VKLGDKVAEG SVLLTLEVAQ GAAAPAAAPA AASTPSAPPS ESKPAPAPAV QAPAAPKTEA
SSFGGSADVE CDVLVLGGGP GGYSAAFRAA DLGLNVVLVE RYATLGGVCL NVGCIPSKAL
LHVAAVMDEV SHLKSAGIDF GAPQVNIHTL RGHKEKVIGK LTGGLAQMAK MRKVTVLRGY
GHFVGANHLE VEETTGTSQD KTGAKKVVAF KRAIIAAGSQ AVRLPFMPDD PRVVDSTGAL
ALKDVPKRML ILGGGIIGLE MGTVYSTLGA RLDVVEMLDG LMQGADRDLV KVWQKMNQHR
FDNVMLNTKT VAAEATPEGI KVSFAPAKDG VTVPEPQVYD LVLQAVGRTP NGKKIAADKA
GVAVTDRGFI NVDIQMRTNV PHIFAIGDIV GQPMLAHKAV HEAHVAAEVI AGELQGNKEL
ASAAFNARVI PSVAYTDPEV AWVGLTEDQA KAQGIKVKKG LFPWAASGRA IANGRDEGFT
KLLFDDSPEA GSGDGHAGRG HGKILGGGMV GTHAGDMIGE IALAIEMGAD AVDIGKTIHP
HPTLGESIGM AAEVAHGSCT DVPPARK