Gene Ajs_2121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2121 
Symbol 
ID4671781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2239352 
End bp2240944 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content64% 
IMG OID639839192 
Productputative transposase 
Protein accessionYP_986366 
Protein GI121594470 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCCGA AATGGGCGGG AGGGCCTGCA AACCGGCCAG ATGGGCCGTT GCAATCGCTG 
CGCAGACGCG TCTGGGCAGC TCGTGTCTTC GCACTCAGCG TCCCTGATGC GTTCGAAAAG
CACTTTTTCA ACGGCCTGCT AGAGTTGGCC AGCGCGGGTC AGTTCGACGG CCAGGGCGAC
CACCACACCC CCAAGCCCTT CGTGCGCAAA GCGTTTGCCA AGTATCTTGA GTGCGGCATC
TTTGCCCATG GCTTTGCCCG CGCTCGCTGC GGCGACTGTG GGCACGACTA CTTTGTAGCC
TTCTCCTGCA AAGGCCGGGG AGTCTGCCCC TCGTGCACCA CCCGGCGCAT GGTGGAGACA
GCAGCGCACC TGAACGATCA CGTATTCCCC CGCCTGCCGG TGCGCCAGTG GGTGCTGTCG
GTTCCCAAGC GGCTTCGTTA CTTCATGCAG CGCGACGGAG CGGTGCTGAG CATGGTGCTG
CGCATCTTTC TGCGGGTGAT CGCACAAACT CTGCAGACCC ACAGCCCCGG TGCGGCCCAT
ATGGACAAGG CAGGCCTGCA CATCGGTGCC ATCGCCTTCA TTCACCGATT CGGCTCCAGC
CTCAATGAAC ACGTCCACTT CCACGTTTGT GTGGTGGACG GGGTGTTTGA GGAAGTGGAG
GGCGAGGGCG ATGCTGATGC GACCCCTCGA ATCTCATCGC CGGGTGTCAT CTTTCACGCG
GCCACCGGCA TCGATGCGGC TACCGTGGCC CCAGTGCAGA CCACACTGCA AAAACGCATC
CTGCGCGCCT TCGTTGCTCG GGGCCTGCTG GAGAACTGTG ACGCCAAAGA CATGCTGGGC
TACAAACACA GCGGCTTCTC GGTGGATGCG GGGGTGTGCA TCGAAGCCCA CGACCGCGCT
GCGCTGGAGC GGCTGCTGCG CTATTGCGCG CGTCCACCGT TTTCCATGGA GCGCCTACGC
AAAGAGGGAA GCAAACTGGT GTACCGCTGT GCCAAACAGC GCAGCGAGCC CACCAGTGAC
AAGCGTGGTG CCAAGGCAGA TGAGCTGCAC CTCACACCGC TGGAACTGAT CGACCGCATC
GCCGCGCTGG TGCCACCGCC ACGCACCCAC CGGCACCGCT ACTTTGGTGT GCTGGCACCA
AACTCGCCGC TGAGAGCGGC GGTAACGGCG CTGGCTCAGC CTGCTGCGTC GCAACCAGCC
ACGGTGGAGA CTGCACAACC TGGCGCGGGC GTACCTGGGG TGGCGGCGCC GGGCAACGCG
GCCACACCCA CACCCGAACC TGAAGCACGC CCGAAGCGAG CGGCGCATTA CTTGTGGGCG
GTGCTGATTA CCCGCATCTA CGAGGCATTT CCGCTGCTGT GCCCCATGTG CGGTGGGCAG
ATGCGCATCA TTGCCTTCAT CACCCACAGC GCCGAAATCC GCCACATCCT GAACCACATC
GGGGTGGAGT CTGCCCCCCC GCACATCACC CCGGCACGCG GGCCACCGCT GTGGGAGGGC
TGCGACGCGC CGGTGGATGA TGGTGCGCAA GGCGAGCCGG ATTGGGATCT GGCAGCTCAA
CCCGACGAGG TAGACCAGCG CGTCAATTGG TGA
 
Protein sequence
MRPKWAGGPA NRPDGPLQSL RRRVWAARVF ALSVPDAFEK HFFNGLLELA SAGQFDGQGD 
HHTPKPFVRK AFAKYLECGI FAHGFARARC GDCGHDYFVA FSCKGRGVCP SCTTRRMVET
AAHLNDHVFP RLPVRQWVLS VPKRLRYFMQ RDGAVLSMVL RIFLRVIAQT LQTHSPGAAH
MDKAGLHIGA IAFIHRFGSS LNEHVHFHVC VVDGVFEEVE GEGDADATPR ISSPGVIFHA
ATGIDAATVA PVQTTLQKRI LRAFVARGLL ENCDAKDMLG YKHSGFSVDA GVCIEAHDRA
ALERLLRYCA RPPFSMERLR KEGSKLVYRC AKQRSEPTSD KRGAKADELH LTPLELIDRI
AALVPPPRTH RHRYFGVLAP NSPLRAAVTA LAQPAASQPA TVETAQPGAG VPGVAAPGNA
ATPTPEPEAR PKRAAHYLWA VLITRIYEAF PLLCPMCGGQ MRIIAFITHS AEIRHILNHI
GVESAPPHIT PARGPPLWEG CDAPVDDGAQ GEPDWDLAAQ PDEVDQRVNW