Gene Ajs_2106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2106 
Symbol 
ID4670577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2227363 
End bp2227854 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content70% 
IMG OID639839181 
ProductMgtC/SapB transporter 
Protein accessionYP_986355 
Protein GI121594459 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCT GGCAGGAGAT CTGGGCCACG GTCTACGCCG AATTCAGCGA CATTCCCGAC 
GTCGGCGAGG CCACCCGCAT CGTGCTGCGC CTGGGCATGG CCTTCGTGCT GGGCGGGCTG
CTGGGTTACG AGCGCGAGCG CAGCGGCAAG GCCGCGGGCC TGCGCACCCA CATGCTGGTG
GCGCTGGGCG CGGCCCTGTT CGTGCTGGTG CCGCTGCAGG CCGGCATGCA GGTGGGCGAC
CTGAGCCGCG TGCTGCAGGG CGTGATCGCC GGCATCGGGT TCCTGGGGGC GGGAGCCATC
ATCAAGCTCG GCGGCGAACG CGAGATCCGC GGCCTGACCA CCTCGGCCAG CATCTGGATG
ACGGCGGCCA TCGGCGTGGC CGCCGGGATG GGGCGGGAAG CCACGGCGGT GGTCAGCACC
CTGATCGCGC TGTTCGTGCT GGCGGTGCTG CGCCGGGTCG AGAAGCGGAT CGAAGAAAAA
GAAGCGGGGT GA
 
Protein sequence
MTIWQEIWAT VYAEFSDIPD VGEATRIVLR LGMAFVLGGL LGYERERSGK AAGLRTHMLV 
ALGAALFVLV PLQAGMQVGD LSRVLQGVIA GIGFLGAGAI IKLGGEREIR GLTTSASIWM
TAAIGVAAGM GREATAVVST LIALFVLAVL RRVEKRIEEK EAG