Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2086 |
Symbol | |
ID | 4671847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 2202062 |
End bp | 2205586 |
Gene Length | 3525 bp |
Protein Length | 1174 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639839164 |
Product | chromosome segregation protein SMC |
Protein accession | YP_986338 |
Protein GI | 121594442 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.87089 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGTCTTA ACTCGATCAA ACTCGCCGGC TTCAAGTCGT TTGCCGAGCC CACCAACTTC ATGCTGCCGG GGCAACTCGT GGGCGTGGTG GGCCCCAACG GTTGCGGCAA GTCCAACATC ATGGACGCCG TGCGCTGGGT GCTGGGCGAG AGCAAGGCCA GCGAGCTGCG CGGCGAGAGC ATGCAGGACG TGATCTTCAA CGGCACCACC AGCCGCAAGC CGGCCAGCCG TTCCAGCGTG GAGCTGACGT TCGACAACAG CGACCACCGC GCGGGCGGGC AGTGGAACCA GTTCACCGAG ATTGCCGTCA AGCGCGTACT CACGCGCGAC GGCACCAGCA GCTACTTCAT CAACAACCAG CCGGTGCGTC GCCGCGACGT GCAGGACGTG TTCCTGGGCA CGGGCCTGGG CCCGCGCGCC TACGCCATCA TCGGCCAGGG CACGATCAGC CGCATCATCG AAAGTCGCCC CGAGGAACTG CGCCTGTTCC TTGAAGAAGC TGCGGGCGTG TCCAAGTACA AGGAGCGCCG GCGCGAGACC GAGAACCGCC TGTCCGACAC GCGAGAGAAC CTCACGCGGG TGGAGGACAT CCTGCGCGAA CTCAATGCCA ACCTCGACAA GCTGGAAAAG CAGGCCGAGG TGGCCGCGCG CTACAACGCG CTGCAGCAGG ACGTGACCCT CAAGCAGCAC CAGCTGTGGT TCCTGAAGCG CGCCGAGGCG GAAAGCGAAC AGGCCCGCGT GCGCACCGAG GGCCTGGCCG CCGTGAACGA CCTGGAGTCG CGCATGGCCG ACCTGCGCCA TGTGGAGGCC GACCTGGAGA CCATCCGCCA GGCGCACTAC GAGGCGGGTG ACAAGGTCAA CCAGGCACAG GGGCGCCTCT ATGAGGCCAC GGCCGAGGTC GGCAAGCTGG AAGCCGAGAT CCGCTACGTG GTCGAGGGCC GCCAGCGCGT CGAGCAGCGC CTGGTGCAGC TGGCCGAGCA GATCGCCCAG TGGTCCGCGC GCAAGGAAGA GGCTGAAGCC GAAGTCGAAA GCATCGAAGG CGCCGGCATG AATGCCGAGG AGCAGGCCGA GATCCTGGCC GCACAGGTCG AGGAGCAGGC GACACGCCTG CCCGAGCTGG AAGACGCCCT GCGCCAGAGC CAGCAGCGCA GCGACGAGCA GCGCGCCGCC GTGGCGCAGG TGCAGCAGCA GATCCAGGTG CTGGCGGCCG AGCAGCGCAG CCTGGACGAG CAAAGCCGCC AACTGGAGGC GCGCCTGGAG CGCCTGCGCA CCGACCGCAA TGCCCTGGCT GCGCCCGACG AGGCGCGCCT GGCCAACCTG CGCCAGCAGT TGCAGCAGGC CGAGGAAGGC GCCGAGATGG CCGAGGCGCG CCTGGCCGAG CTGCAGGACA GCGTGCCCCA GCTCGACGAG GACCGCCGTG CGCGCCAGCA GGTCGTGAAC CAGGAAACGG CCCGGCAGGC CGACCTGTCC GCGCGGCTGG AAGCGCTCAA GGCCTTGCAG GAGAAGGTCA AGGTGGACGG CAAGCTCCAG CCCTGGCTGG CCAAGCACGG GTTGGAAGGG CTGCAGGGAC TGTGGAGCCG CATCCACATC GAACCCGGCT GGGAGAACGC GCTGGAGGCC GCGCTGCGCG AGCGCCTGGC CGCGCTGCCC GTGGGCCGGC TGGACATGGT GCGCGGCTTC CTGGGCGCGG GCGGGCAGGA TGCGCCTCCG GCGCGGCTGG CTTTCTACAG CGCGCCGTCT GCGCCCGCGC CCGAAACCCC CGCTGGTTCA TCGCGCTTGT CGGATCTGCT GCGCGTGCAC GACGCCGGGC TGCACGCCGT GCTGGTGGAC TGGCTGCAGG GCTGCTACAC CGCGCAGACG CTGGACGATG CGCTGAACCG CCGCGCGCAG TTGCAGCCGG GCGAGGCCAT CTATGTGGCA GCCGGCCATG CCGTGGGCGC GCACAGCGTG AGTTTTTATG CGCAGGACTC CGAGCAGTCC GGCCTGCTGG CCCGGGCGCA GGACATCGAA CACCTGGAGA AGGAACTGCG TGCCCAGGCA TTGATCGCTG AGGAGGCGCG CACGGCGCTG GTGCGTGCCG AGAGCCTGTA CGCCGACGCG GCGCAGCGCC TGGTGGCCGC GCGCCGCGAG GCCAGCGAGG CCCAAGGCCG CGCGCACGAG CTGCAGGTCG AGACCCTGCG CCTGTCGCAA TTGGCCGAGC AGACCCGGGC GCGCAGCGAG CAGATTGGCG CCGATCTGTC CGAGGTCGAG GCGCAGTTGG GCGACCTGCA GGAGCGCCGC GTCACCGCGG AGGCGCGTTT TGAAGAACTG GACATGCAAC TGGCCGACAG CCAGGAGCGC CACGCCCAGC TGGGCGACCG TGTGATCGAG GCCGAGCGCC GCCTGGCCGA ATGCCGTGAG CAGCAGCGCG CGCTGGAGCG CCAGGCGCAG GAGGCCCAGT TCTCCCAGCG CAGCCTGCAG GCCCGGCGTG CCGAGCTGGC GCGCACCATC GACACCGCGG CCACGCAGGC ACGCGCGTTG CACGATGAGC GCCAGCGCGC GCAGGACGAG CTTTCGCGCC TGTCCGATGC CGCCGCCCAG GGTGGTCTGC AGCGGGCGCT GAACCTGAAA ATCGAGCGCG AAAAAGACCT GGCCGCCCAG CGCAGCCAGT ACGACGACCT GACGGCGCGG CTGCGCGCCA GCGACGAACT GCGCATGCAG AACGAGCGCA CGCTGGAGCC CCTGCGCGCA CGCATCACGG AGTTCCAGCT CAAGGAGCAG GCGGCGCGCC TGGGCCTGGA GCAGTACAGC ACGCTGCTGG CGGACGCGCA GGCCGACCTG GCGGCGGTGG AGCGTTCCAT CCAGGACGGT GGCGTGCGCA TGGCGGGGTT GCAGGGCGAG ATCGACCGCC TGCACCGCGA GATCACGGCG CTGGGCGCGG TGAACCTGGC CGCGCTGGAG GAGCTGCAGC TCGCGCGCGA GCGCAAGGGC TTCCTGGACG CGCAGACCGA AGACCTGACG CTGGCCATGA CCACGCTGGA GGACGCCATC CGCAAGATCG ACGGCGAGAC GCGCACCCTG CTGTCGGGCA CCTTCGAGAC CGTCAACGGG CACTTCGGCC GCATGTTCCC CGAACTGTTC GGCGGCGGCC AGGCCAAGCT CATCATGACG GGTGACGAGA TCCTCGACTC CGGCGTGCAG GTCATGGCCC AGCCGCCGGG CAAGAAGAAC CAGACCATCC ACCTGCTGTC GGGCGGCGAG AAAGCACTCA CCGCGATCGC GCTGGTGTTC GCCATCTTCC AGCTCAACCC CGCGCCGTTC TGCCTGCTGG ACGAAGTGGA TGCGCCGCTG GATGATGCCA ACACCGAGCG GTATGCCAAG CTGGTGTCCA GCATGTCCAA GGGAACGCAG TTCCTCTTCA TCAGCCACAA CAAGATCGCC ATGGAGATGG CCGAGCAACT GATCGGCGTC ACCATGCAGG AGCAGGGCGT GTCGCGCATC GTGGCCGTGG ACATGGAGTC CGCGCTGTCC ATGGCCGAGG CCTGA
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Protein sequence | MRLNSIKLAG FKSFAEPTNF MLPGQLVGVV GPNGCGKSNI MDAVRWVLGE SKASELRGES MQDVIFNGTT SRKPASRSSV ELTFDNSDHR AGGQWNQFTE IAVKRVLTRD GTSSYFINNQ PVRRRDVQDV FLGTGLGPRA YAIIGQGTIS RIIESRPEEL RLFLEEAAGV SKYKERRRET ENRLSDTREN LTRVEDILRE LNANLDKLEK QAEVAARYNA LQQDVTLKQH QLWFLKRAEA ESEQARVRTE GLAAVNDLES RMADLRHVEA DLETIRQAHY EAGDKVNQAQ GRLYEATAEV GKLEAEIRYV VEGRQRVEQR LVQLAEQIAQ WSARKEEAEA EVESIEGAGM NAEEQAEILA AQVEEQATRL PELEDALRQS QQRSDEQRAA VAQVQQQIQV LAAEQRSLDE QSRQLEARLE RLRTDRNALA APDEARLANL RQQLQQAEEG AEMAEARLAE LQDSVPQLDE DRRARQQVVN QETARQADLS ARLEALKALQ EKVKVDGKLQ PWLAKHGLEG LQGLWSRIHI EPGWENALEA ALRERLAALP VGRLDMVRGF LGAGGQDAPP ARLAFYSAPS APAPETPAGS SRLSDLLRVH DAGLHAVLVD WLQGCYTAQT LDDALNRRAQ LQPGEAIYVA AGHAVGAHSV SFYAQDSEQS GLLARAQDIE HLEKELRAQA LIAEEARTAL VRAESLYADA AQRLVAARRE ASEAQGRAHE LQVETLRLSQ LAEQTRARSE QIGADLSEVE AQLGDLQERR VTAEARFEEL DMQLADSQER HAQLGDRVIE AERRLAECRE QQRALERQAQ EAQFSQRSLQ ARRAELARTI DTAATQARAL HDERQRAQDE LSRLSDAAAQ GGLQRALNLK IEREKDLAAQ RSQYDDLTAR LRASDELRMQ NERTLEPLRA RITEFQLKEQ AARLGLEQYS TLLADAQADL AAVERSIQDG GVRMAGLQGE IDRLHREITA LGAVNLAALE ELQLARERKG FLDAQTEDLT LAMTTLEDAI RKIDGETRTL LSGTFETVNG HFGRMFPELF GGGQAKLIMT GDEILDSGVQ VMAQPPGKKN QTIHLLSGGE KALTAIALVF AIFQLNPAPF CLLDEVDAPL DDANTERYAK LVSSMSKGTQ FLFISHNKIA MEMAEQLIGV TMQEQGVSRI VAVDMESALS MAEA
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