Gene Ajs_2086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2086 
Symbol 
ID4671847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2202062 
End bp2205586 
Gene Length3525 bp 
Protein Length1174 aa 
Translation table11 
GC content69% 
IMG OID639839164 
Productchromosome segregation protein SMC 
Protein accessionYP_986338 
Protein GI121594442 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID[TIGR02168] chromosome segregation protein SMC, common bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.87089 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTCTTA ACTCGATCAA ACTCGCCGGC TTCAAGTCGT TTGCCGAGCC CACCAACTTC 
ATGCTGCCGG GGCAACTCGT GGGCGTGGTG GGCCCCAACG GTTGCGGCAA GTCCAACATC
ATGGACGCCG TGCGCTGGGT GCTGGGCGAG AGCAAGGCCA GCGAGCTGCG CGGCGAGAGC
ATGCAGGACG TGATCTTCAA CGGCACCACC AGCCGCAAGC CGGCCAGCCG TTCCAGCGTG
GAGCTGACGT TCGACAACAG CGACCACCGC GCGGGCGGGC AGTGGAACCA GTTCACCGAG
ATTGCCGTCA AGCGCGTACT CACGCGCGAC GGCACCAGCA GCTACTTCAT CAACAACCAG
CCGGTGCGTC GCCGCGACGT GCAGGACGTG TTCCTGGGCA CGGGCCTGGG CCCGCGCGCC
TACGCCATCA TCGGCCAGGG CACGATCAGC CGCATCATCG AAAGTCGCCC CGAGGAACTG
CGCCTGTTCC TTGAAGAAGC TGCGGGCGTG TCCAAGTACA AGGAGCGCCG GCGCGAGACC
GAGAACCGCC TGTCCGACAC GCGAGAGAAC CTCACGCGGG TGGAGGACAT CCTGCGCGAA
CTCAATGCCA ACCTCGACAA GCTGGAAAAG CAGGCCGAGG TGGCCGCGCG CTACAACGCG
CTGCAGCAGG ACGTGACCCT CAAGCAGCAC CAGCTGTGGT TCCTGAAGCG CGCCGAGGCG
GAAAGCGAAC AGGCCCGCGT GCGCACCGAG GGCCTGGCCG CCGTGAACGA CCTGGAGTCG
CGCATGGCCG ACCTGCGCCA TGTGGAGGCC GACCTGGAGA CCATCCGCCA GGCGCACTAC
GAGGCGGGTG ACAAGGTCAA CCAGGCACAG GGGCGCCTCT ATGAGGCCAC GGCCGAGGTC
GGCAAGCTGG AAGCCGAGAT CCGCTACGTG GTCGAGGGCC GCCAGCGCGT CGAGCAGCGC
CTGGTGCAGC TGGCCGAGCA GATCGCCCAG TGGTCCGCGC GCAAGGAAGA GGCTGAAGCC
GAAGTCGAAA GCATCGAAGG CGCCGGCATG AATGCCGAGG AGCAGGCCGA GATCCTGGCC
GCACAGGTCG AGGAGCAGGC GACACGCCTG CCCGAGCTGG AAGACGCCCT GCGCCAGAGC
CAGCAGCGCA GCGACGAGCA GCGCGCCGCC GTGGCGCAGG TGCAGCAGCA GATCCAGGTG
CTGGCGGCCG AGCAGCGCAG CCTGGACGAG CAAAGCCGCC AACTGGAGGC GCGCCTGGAG
CGCCTGCGCA CCGACCGCAA TGCCCTGGCT GCGCCCGACG AGGCGCGCCT GGCCAACCTG
CGCCAGCAGT TGCAGCAGGC CGAGGAAGGC GCCGAGATGG CCGAGGCGCG CCTGGCCGAG
CTGCAGGACA GCGTGCCCCA GCTCGACGAG GACCGCCGTG CGCGCCAGCA GGTCGTGAAC
CAGGAAACGG CCCGGCAGGC CGACCTGTCC GCGCGGCTGG AAGCGCTCAA GGCCTTGCAG
GAGAAGGTCA AGGTGGACGG CAAGCTCCAG CCCTGGCTGG CCAAGCACGG GTTGGAAGGG
CTGCAGGGAC TGTGGAGCCG CATCCACATC GAACCCGGCT GGGAGAACGC GCTGGAGGCC
GCGCTGCGCG AGCGCCTGGC CGCGCTGCCC GTGGGCCGGC TGGACATGGT GCGCGGCTTC
CTGGGCGCGG GCGGGCAGGA TGCGCCTCCG GCGCGGCTGG CTTTCTACAG CGCGCCGTCT
GCGCCCGCGC CCGAAACCCC CGCTGGTTCA TCGCGCTTGT CGGATCTGCT GCGCGTGCAC
GACGCCGGGC TGCACGCCGT GCTGGTGGAC TGGCTGCAGG GCTGCTACAC CGCGCAGACG
CTGGACGATG CGCTGAACCG CCGCGCGCAG TTGCAGCCGG GCGAGGCCAT CTATGTGGCA
GCCGGCCATG CCGTGGGCGC GCACAGCGTG AGTTTTTATG CGCAGGACTC CGAGCAGTCC
GGCCTGCTGG CCCGGGCGCA GGACATCGAA CACCTGGAGA AGGAACTGCG TGCCCAGGCA
TTGATCGCTG AGGAGGCGCG CACGGCGCTG GTGCGTGCCG AGAGCCTGTA CGCCGACGCG
GCGCAGCGCC TGGTGGCCGC GCGCCGCGAG GCCAGCGAGG CCCAAGGCCG CGCGCACGAG
CTGCAGGTCG AGACCCTGCG CCTGTCGCAA TTGGCCGAGC AGACCCGGGC GCGCAGCGAG
CAGATTGGCG CCGATCTGTC CGAGGTCGAG GCGCAGTTGG GCGACCTGCA GGAGCGCCGC
GTCACCGCGG AGGCGCGTTT TGAAGAACTG GACATGCAAC TGGCCGACAG CCAGGAGCGC
CACGCCCAGC TGGGCGACCG TGTGATCGAG GCCGAGCGCC GCCTGGCCGA ATGCCGTGAG
CAGCAGCGCG CGCTGGAGCG CCAGGCGCAG GAGGCCCAGT TCTCCCAGCG CAGCCTGCAG
GCCCGGCGTG CCGAGCTGGC GCGCACCATC GACACCGCGG CCACGCAGGC ACGCGCGTTG
CACGATGAGC GCCAGCGCGC GCAGGACGAG CTTTCGCGCC TGTCCGATGC CGCCGCCCAG
GGTGGTCTGC AGCGGGCGCT GAACCTGAAA ATCGAGCGCG AAAAAGACCT GGCCGCCCAG
CGCAGCCAGT ACGACGACCT GACGGCGCGG CTGCGCGCCA GCGACGAACT GCGCATGCAG
AACGAGCGCA CGCTGGAGCC CCTGCGCGCA CGCATCACGG AGTTCCAGCT CAAGGAGCAG
GCGGCGCGCC TGGGCCTGGA GCAGTACAGC ACGCTGCTGG CGGACGCGCA GGCCGACCTG
GCGGCGGTGG AGCGTTCCAT CCAGGACGGT GGCGTGCGCA TGGCGGGGTT GCAGGGCGAG
ATCGACCGCC TGCACCGCGA GATCACGGCG CTGGGCGCGG TGAACCTGGC CGCGCTGGAG
GAGCTGCAGC TCGCGCGCGA GCGCAAGGGC TTCCTGGACG CGCAGACCGA AGACCTGACG
CTGGCCATGA CCACGCTGGA GGACGCCATC CGCAAGATCG ACGGCGAGAC GCGCACCCTG
CTGTCGGGCA CCTTCGAGAC CGTCAACGGG CACTTCGGCC GCATGTTCCC CGAACTGTTC
GGCGGCGGCC AGGCCAAGCT CATCATGACG GGTGACGAGA TCCTCGACTC CGGCGTGCAG
GTCATGGCCC AGCCGCCGGG CAAGAAGAAC CAGACCATCC ACCTGCTGTC GGGCGGCGAG
AAAGCACTCA CCGCGATCGC GCTGGTGTTC GCCATCTTCC AGCTCAACCC CGCGCCGTTC
TGCCTGCTGG ACGAAGTGGA TGCGCCGCTG GATGATGCCA ACACCGAGCG GTATGCCAAG
CTGGTGTCCA GCATGTCCAA GGGAACGCAG TTCCTCTTCA TCAGCCACAA CAAGATCGCC
ATGGAGATGG CCGAGCAACT GATCGGCGTC ACCATGCAGG AGCAGGGCGT GTCGCGCATC
GTGGCCGTGG ACATGGAGTC CGCGCTGTCC ATGGCCGAGG CCTGA
 
Protein sequence
MRLNSIKLAG FKSFAEPTNF MLPGQLVGVV GPNGCGKSNI MDAVRWVLGE SKASELRGES 
MQDVIFNGTT SRKPASRSSV ELTFDNSDHR AGGQWNQFTE IAVKRVLTRD GTSSYFINNQ
PVRRRDVQDV FLGTGLGPRA YAIIGQGTIS RIIESRPEEL RLFLEEAAGV SKYKERRRET
ENRLSDTREN LTRVEDILRE LNANLDKLEK QAEVAARYNA LQQDVTLKQH QLWFLKRAEA
ESEQARVRTE GLAAVNDLES RMADLRHVEA DLETIRQAHY EAGDKVNQAQ GRLYEATAEV
GKLEAEIRYV VEGRQRVEQR LVQLAEQIAQ WSARKEEAEA EVESIEGAGM NAEEQAEILA
AQVEEQATRL PELEDALRQS QQRSDEQRAA VAQVQQQIQV LAAEQRSLDE QSRQLEARLE
RLRTDRNALA APDEARLANL RQQLQQAEEG AEMAEARLAE LQDSVPQLDE DRRARQQVVN
QETARQADLS ARLEALKALQ EKVKVDGKLQ PWLAKHGLEG LQGLWSRIHI EPGWENALEA
ALRERLAALP VGRLDMVRGF LGAGGQDAPP ARLAFYSAPS APAPETPAGS SRLSDLLRVH
DAGLHAVLVD WLQGCYTAQT LDDALNRRAQ LQPGEAIYVA AGHAVGAHSV SFYAQDSEQS
GLLARAQDIE HLEKELRAQA LIAEEARTAL VRAESLYADA AQRLVAARRE ASEAQGRAHE
LQVETLRLSQ LAEQTRARSE QIGADLSEVE AQLGDLQERR VTAEARFEEL DMQLADSQER
HAQLGDRVIE AERRLAECRE QQRALERQAQ EAQFSQRSLQ ARRAELARTI DTAATQARAL
HDERQRAQDE LSRLSDAAAQ GGLQRALNLK IEREKDLAAQ RSQYDDLTAR LRASDELRMQ
NERTLEPLRA RITEFQLKEQ AARLGLEQYS TLLADAQADL AAVERSIQDG GVRMAGLQGE
IDRLHREITA LGAVNLAALE ELQLARERKG FLDAQTEDLT LAMTTLEDAI RKIDGETRTL
LSGTFETVNG HFGRMFPELF GGGQAKLIMT GDEILDSGVQ VMAQPPGKKN QTIHLLSGGE
KALTAIALVF AIFQLNPAPF CLLDEVDAPL DDANTERYAK LVSSMSKGTQ FLFISHNKIA
MEMAEQLIGV TMQEQGVSRI VAVDMESALS MAEA