Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2083 |
Symbol | |
ID | 4671145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 2198316 |
End bp | 2200511 |
Gene Length | 2196 bp |
Protein Length | 731 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639839161 |
Product | DNA ligase, NAD-dependent |
Protein accession | YP_986335 |
Protein GI | 121594439 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0521924 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAAC AATCCGACCT TTTTCCGGCT CCCGCGCCCA AGGGGTCTGC GCTGGTAGCT ACAAAAATCA AAGCGCTGCG CGAGCAGCTG AACCGCTGGG CGCACGAGTA CTACGTCCAG GACACGCCGA GCGTGCCCGA TGCCGAGTAT GACCGCGCGT TCCAGCAGTT GCAGGCGCTG GAGGGCGCTT ACCCCGACCT GGTGACGCCC GACTCGCCCA CGCAGCGCGT GCTGGGCGCG GTGCTGGACG GGCTGACACC GGTGCGCCAC CGCGTGCCCA TGCTCAGCAT CCGCACTGAA ACCGACACAG AGGCCAGCGG CGCCCAAGCC TTCGACGCGC GCGTGCGCCG TGAACTGAAG CTGCCGCCCG ATGCGCCGCC GGTGGAATAC GTGGCCGAAC CCAAGTTCGA CGGCCTGGCG ATGAGCCTGC GCTACGAGGG CGGGCGCCTG GTGCAGGCCG CCACGCGCGG TGACGGCGAG GTGGGTGAGG ATGTGACGCA CAACGTGCGC ACCATCCGCC AGATCCCCCT GAGCCTGCCC GCCGGTGTGC CGCCGGTGCT GGAGGTGCGC GGGGAGGTCT ACATGCGCCG CGCGGACTTC GACGCACTCA ACGAGCGCCA GCGCGAGAAG GGCGACAAGA CCTTCGTCAA CCCGCGCAAC GCCGCCGCCG GCGCGGTGCG CCAGTTGGAC TCAGGCATCA CCGCGCAGCG GCCGCTGTCC TTCTTCGCCT ACGGCCTGGG CGAGGTCACG CCGGCCGCCG AGGGCGGGCC CGACTTCGGC ACGCACTTCG GCATGCTGCA GCAGCTCAAG GAATGGGGCT TTCCGGTCGC AGCCCAGGTG CAGATTGCGC AAGGCGCTTC TGAACTCATA GCGTTCCATC AGCGTGTGGG GGCCGAACGG GACGCGCTGC CCTACGACAT CGACGGCGTG GTCTACAAGG TCAACAGCCT GGCACTGCAG CGCCAGCTGG GCTTTGTGAC GCGCGAGCCG CGCTGGGCCG TGGCCCACAA GTATCCGGCC CAGGAGATGG TCACGCGCGT GGAAGGCATC GACGTGCAGG TGGGCCGCAC GGGCAAGCTG ACGCCCGTGG CGCGACTCGC GCCGGTGTTC GTGGGCGGCG TCACGGTGAC CAATGCCACG CTGCACAACC TGTTCGAGCT GCGCCGCAAG AAAGTGCGCG TGGGCGACCA GGTGATCGTG CGCCGCGCGG GCGACGTGAT TCCCGAGGTG GTGGGCGTGG TGCCGGCGGG CGCAGGCCTG GCAGTGCTGG CGGGCTCCGA CGCGCTGGTG GACGCCGCCA GCAGCGCGGA CGGCACCGCA CCCGCGCAGC CGCTGGCGGG GCCGCGCCAG CCCTACGTGC CCAACTTCCG CATGCCGCGC CAGTGCCCCA TCTGCGGCAG CGCCGTGGTG CGCGAGCCGG GCGAGGTCAA CCACCGCTGC TCCGGCGGGC TGTTCTGCCC CGCGCAGCGC AAACAGGCGG TGCTGCACTT CGCCCAGCGC CGCGCCATGG ACATCGAGGG CCTGGGCGAG AAGCTGGTGG ACCAGCTCGT GGACGGCCAC GTGATCCGCA CGCTGCCCGA CCTGTACCGG CTCGGGCTGT CCAGCCTTGC GCAGCTCGAC CGCATGGCCG AGAAGTCCGC GCAGAACGTG CTGGATGCGC TCGACAAATC CAAGCGCACC ACGCTGGCGC GCTTTCTCTT CGGCCTGGGC ATCCGCCATG TGGGCGAGGC CACGGCCAAG GACCTGGCGC GCCACTTCGG CCAGTTGGAC GCCATCATGG ATGCGGGCGT GGAGCAGTTG CTGCAGGTGA ACGACGTGGG GCCCGTGGTG GCCGAGGCCA TCCACACCTT CTTCGCGCAA CCCCACAACC GCGAGGTGGT CGAGCAACTG CGGGCCTGCG GCGTCACCTG GGACGAGAGC GAGCCCGCTG CCGCCGCCAC GCTGCCCCTG GCGGGCATGA CCGTGGTGCT GACCGGCACG CTGCCCACCC TGGGCCGCGA CGCGGCCAAG GACCTGCTGG AGTCCGCCGG TGCCAAGGTG GCAGGTTCGG TCAGCAAGAA GACGCACTAC GTGGTGGCCG GCGCCGACGC GGGCAGCAAG CTCGCCAAGG CGCAGGAGCT GGGCATCCCC GTGCTGGACG AGGACGGGTT GCATGCGTTG CTGCGGGGCA CACCGCCCAA CGCAGGTGGG GCCTAG
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Protein sequence | MTEQSDLFPA PAPKGSALVA TKIKALREQL NRWAHEYYVQ DTPSVPDAEY DRAFQQLQAL EGAYPDLVTP DSPTQRVLGA VLDGLTPVRH RVPMLSIRTE TDTEASGAQA FDARVRRELK LPPDAPPVEY VAEPKFDGLA MSLRYEGGRL VQAATRGDGE VGEDVTHNVR TIRQIPLSLP AGVPPVLEVR GEVYMRRADF DALNERQREK GDKTFVNPRN AAAGAVRQLD SGITAQRPLS FFAYGLGEVT PAAEGGPDFG THFGMLQQLK EWGFPVAAQV QIAQGASELI AFHQRVGAER DALPYDIDGV VYKVNSLALQ RQLGFVTREP RWAVAHKYPA QEMVTRVEGI DVQVGRTGKL TPVARLAPVF VGGVTVTNAT LHNLFELRRK KVRVGDQVIV RRAGDVIPEV VGVVPAGAGL AVLAGSDALV DAASSADGTA PAQPLAGPRQ PYVPNFRMPR QCPICGSAVV REPGEVNHRC SGGLFCPAQR KQAVLHFAQR RAMDIEGLGE KLVDQLVDGH VIRTLPDLYR LGLSSLAQLD RMAEKSAQNV LDALDKSKRT TLARFLFGLG IRHVGEATAK DLARHFGQLD AIMDAGVEQL LQVNDVGPVV AEAIHTFFAQ PHNREVVEQL RACGVTWDES EPAAAATLPL AGMTVVLTGT LPTLGRDAAK DLLESAGAKV AGSVSKKTHY VVAGADAGSK LAKAQELGIP VLDEDGLHAL LRGTPPNAGG A
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