Gene Ajs_2077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2077 
Symbol 
ID4670782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2191265 
End bp2191933 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content68% 
IMG OID639839155 
Productmaleylacetoacetate isomerase 
Protein accessionYP_986329 
Protein GI121594433 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID[TIGR01262] maleylacetoacetate isomerase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.238722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.903317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCT ACAACTACTT CCGCTCCTCG GCATCGTTTC GCGTGCGCAT CGCGCTGGAA 
GTCAAGGGCC TGCCCTATGA CTACCTGCCG GTCCACCTGG TCAAGGCAGA GCATTTGGCG
CCCGGCTATG CCGACCGCGT GGGTGACGCG CTGGTGCCGG CGTTGCAGAC CGATGACGGC
CACCTGCTCA CGCAGTCGAT GGCGATCATC GAATATCTGG ACGAGACCCA CCGCGAGCCT
GCGCTGCTGC CCGGCGACGC GCTGGCGCGC GCGCGCGTGC GGGCGCTGGC GCAGATGGTG
GCCTGCGAGA TCCACCCCCT GAACAACCTG CGTGTGCTCA AGTACCTCAA GCACCAGCTG
CAGGTGGAAG ACGCCGCCAA GGACGCCTGG TACCGCCACT GGGTGCGCAA GGGCCTGGAG
GCGTTCGAGC GGCAGCTGGT GCTGCTGGAC GGTGAACGCC AGGCCGCCGG GCTGGCACCC
TCGCGCCTGT GCTGGGGCGA TACGCCCACG CTGGCCGACT GCTGCCTGGT GCCGCAGATC
TTCAACGGCC GGCGCTTCCA TGTGGACATG GACGGTCTGC CGCGCACGAT GGCCGCGTTC
GACGCATGCA TGGCGCTGCC GGCCTTCCAG CGCGCGCAGC CGTCTGCCTG CTCGGACCAC
GAGGCCTGA
 
Protein sequence
MKLYNYFRSS ASFRVRIALE VKGLPYDYLP VHLVKAEHLA PGYADRVGDA LVPALQTDDG 
HLLTQSMAII EYLDETHREP ALLPGDALAR ARVRALAQMV ACEIHPLNNL RVLKYLKHQL
QVEDAAKDAW YRHWVRKGLE AFERQLVLLD GERQAAGLAP SRLCWGDTPT LADCCLVPQI
FNGRRFHVDM DGLPRTMAAF DACMALPAFQ RAQPSACSDH EA