| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2069 |
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| Symbol | |
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| ID | 4671389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 2181459 |
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| End bp | 2182634 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639839147 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_986321 |
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| Protein GI | 121594425 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.370348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.325609 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCCCA CCCTGCTACT GACCGAACAG CTCATCGCCC GCCCCTCCGT CACGCCCGAC
GACGCGGGCT GCCTGGACTT GCTGGCCCGG CGCCTCGCTC CCTTGGGCTT TGCCTGCGAG
CGACTGGACA GCGGGCCCGA GAACTTCCGC GTCAGCAATT TGTGGTCAAA ACGCAGTGCA
GCGCTCTCTG GACAAGCGCA AGCAGCTACC AAAACAGTAG TATTCGCCGG CCACACCGAC
GTGGTGCCCA CGGGCCCCGT GGAGCAGTGG AGCAGCCCGC CGTTCACCCC CACACACCGG
GACGGCCGCC TGTACGGCCG CGGCGCGAGT GACATGAAGG CCTCGATCGC CGCATTCGTT
GTCGCGGTCG AGGAGTTCCT GGCCGCCACG CCCGACCCGC GCCTGGATAT CGCGCTGCTG
CTGACCAGCG ACGAGGAAGG CCCCTCGGTG GACGGCACCA AGGTGGTCAT TGAGCAGTTG
CGCGCGCGCG GGGAGCGGCT GGACTGGTGC ATCGTGGGCG AGCCTACCTC GGTCGAGCAG
ACCGGCGACA TGATCAAGAA CGGCCGCCGC GGCACGCTGT CCGGGCGGCT CACCGTGCGG
GGGGTGCAGG GCCACATCGC CTACCCGCAG CTGGCGCGCA ACCCCATCCA CCAGGCCGTG
CCCGCGCTCA CCGAGCTCGC CGCCACCGTG TGGGATATGG GCAACGCCTT CTTTCCGCCG
ACCAGCTGGC AGATGAGCAA CATCCACGGC GGCACCGGTG CGACCAACGT GATCCCCGGC
CAGGTGGTGA TCGACTTCAA CTTCCGCTTC AGCACCGAAT CGACCGCCGA AGGGCTGCAG
CAGCGCGTGC ATGCGGTACT GGACCGCCAC GGACTGGAAT ACGACCTGAC CTGGACGCTG
GGCGGCCAGC CCTTCCTGAC CACGCCGGGC GAACTGGTGC AGGCGGTGCA GCAAGCCATC
CGCGCCGAGA CCGGGTTGGA AACCGAGCTG TCCACCACCG GCGGCACCAG CGACGGGCGC
TTCATTGCCC AGATTTGCCC CCAGGTGATC GAGCTGGGCC CGCCCAACGC CAGCATCCAC
AAGATCGACG AGAACGTGCG CTTGGTCGAC ATCGAGCCGC TCAAGAACAT CTACCGCCGC
ACGCTCGAGC ATCTCAACGC ACTGGCGGGC GCATGA
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| Protein sequence | MSPTLLLTEQ LIARPSVTPD DAGCLDLLAR RLAPLGFACE RLDSGPENFR VSNLWSKRSA
ALSGQAQAAT KTVVFAGHTD VVPTGPVEQW SSPPFTPTHR DGRLYGRGAS DMKASIAAFV
VAVEEFLAAT PDPRLDIALL LTSDEEGPSV DGTKVVIEQL RARGERLDWC IVGEPTSVEQ
TGDMIKNGRR GTLSGRLTVR GVQGHIAYPQ LARNPIHQAV PALTELAATV WDMGNAFFPP
TSWQMSNIHG GTGATNVIPG QVVIDFNFRF STESTAEGLQ QRVHAVLDRH GLEYDLTWTL
GGQPFLTTPG ELVQAVQQAI RAETGLETEL STTGGTSDGR FIAQICPQVI ELGPPNASIH
KIDENVRLVD IEPLKNIYRR TLEHLNALAG A
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