| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2068 |
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| Symbol | |
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| ID | 4671373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 2180252 |
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| End bp | 2181415 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639839146 |
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| Product | twitching motility protein |
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| Protein accession | YP_986320 |
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| Protein GI | 121594424 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0618461 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.330404 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGA TGGAGCGGAT TCTGCGCCTG ATGGCCGACA AGAAGGCATC CGATGTCTAC
CTGTCGGCCA ACGCACCGGC GCTGATCAAG ATCAACGGCG AATGCGTGCC GATCAACAGC
CAGATCCTGC CGCCCGACGC GCCCAAGAAC CTGCTGTCCG AGATCGTCCC CCCCGACCGC
ATCGAAGAGC TGGAAGAGAC CGGTGAGCTC AACATGGGTG TGCCGCTCAC CGGCGTAGGG
CGCTTTCGCG TCAGCGCGAT GCGCCAGCGC GGCACCTATG CGGTGGTGAT CCGCTTCATC
ACGCAGAACA TCCCGCAGTT GTCCACGCTG CACCTGCCGC CGGTGCTCAG CGAGCTGATC
ATGGAAAAGC GCGGCCTGAT CCTGCTCGTG GGCGCCACGG GCTCGGGCAA GAGCACGACG
CTGGCGGCGA TGCTGGACGC GCGCAACGAG TCCATGACCG GCCACATCCT CACGGTGGAG
GACCCGGTCG AATACCAGTT CAAGAACAAG AAGTCCATCG TCAACCAGCG GGAGATCGGC
AGCGACACCC AGTCGCTGCA GACCGCGCTC AAGAACGCGC TGCGACAGGC GCCCGACGTG
ATCCTGATCG GCGAAATCCG TGACCGCGAG ACCATGTCCG CCGCCATCGC CTACGCCCAG
TCGGGCCACC TGTGCCTGGC CACGCTGCAC GGCAACAACA GCTACCACGC CCTCAACCGC
ATCCTGTCGT TCTATCCCGT GGAGGTGCGC CCCACGATGC TGGGCGACCT GGCGTCCGCG
CTCAAGGCCA TCATCTCGCA GCGCCTGGTA CGCACCACGA CCGGCGAGCG CGTGCCCGCG
GCGGAGGTCA TGCTCAACAC CAAGCTGGTG GCCGAGCTGG TGGAAAAGGG CGACTTCTCG
GGGATCCGCG AGGCCATGGA AAAATCCATG GCCGAAGGCT CGCAGACCTT CGAGGAAGCG
CTGGCCCACC TGATCCTGGA GGGCAAGATC GACCGCAAGG AAGGCCTGGC CTACGCCGAC
TCCCCCACCA ACCTCATGTG GCGCCTGCAA AACGACTTCT CGGCTGCCGC GAAGTCGGCG
CGCGCCGTCA ACGACGCCGG CCAGCAGTCC GAGGACGATG CCCCCTCGTT CACCGAGATC
GTGCTGGACG TCAAGCCCGC CTGA
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| Protein sequence | MSTMERILRL MADKKASDVY LSANAPALIK INGECVPINS QILPPDAPKN LLSEIVPPDR
IEELEETGEL NMGVPLTGVG RFRVSAMRQR GTYAVVIRFI TQNIPQLSTL HLPPVLSELI
MEKRGLILLV GATGSGKSTT LAAMLDARNE SMTGHILTVE DPVEYQFKNK KSIVNQREIG
SDTQSLQTAL KNALRQAPDV ILIGEIRDRE TMSAAIAYAQ SGHLCLATLH GNNSYHALNR
ILSFYPVEVR PTMLGDLASA LKAIISQRLV RTTTGERVPA AEVMLNTKLV AELVEKGDFS
GIREAMEKSM AEGSQTFEEA LAHLILEGKI DRKEGLAYAD SPTNLMWRLQ NDFSAAAKSA
RAVNDAGQQS EDDAPSFTEI VLDVKPA
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