| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2067 |
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| Symbol | dapD |
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| ID | 4671359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 2179371 |
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| End bp | 2180195 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639839145 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_986319 |
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| Protein GI | 121594423 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.293351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAC AATTGCAGAC CCTGATCGAC AACGCCTGGG ACAACCGCGC CAGCCTCTCG
CCCTCCGCCG CGCCCAAGGA AGTGGTGGAT GCCGTCGAGC ATGTGATCGC CGAACTCAAC
AACGGCAGGC TGCGCGTGGC CACGCGCGAG GGCGTGGGCC AGTGGACCGT GCACCAGTGG
ATCAAGAAGG CCGTGCTGCT GTCGTTCCGC CTGAAGGACA ACGAGCTCAT GAAGGCCGGC
GACCTGGGCT TCTTCGACAA GGTGCCCACC AAGTTCGCCC ACCTGTCCGC CGACGAGATG
GCCGCCACCG GCGTGCGCGT GGTGCCGCCG GCCGTGGCGC GCCGCGGCAG CTTCATCGCC
AAGGGCGCGA TCCTGATGCC CAGCTACGTG AACATCGGCG CCTATGTGGA CGAAGGCACC
ATGGTGGACA CCTGGGCCAC CGTGGGCTCG TGCGCGCAGG TCGGAAAGAA CGTGCACCTG
TCCGGCGGCG TGGGGCTGGG CGGCGTGCTC GAGCCCCTGC AGGCCAACCC GACCATCATC
GAGGACAACT GCTTCATCGG CGCGCGCTCC GAAGTCGTCG AGGGCGTGAT CGTCGAAGAG
AACTCGGTCA TCAGCATGGG CGTGTACATC GGTCAGAGCA CGCCGATCTA CGACCGCACC
ACGGGCGAGA TCACCTACGG TCGCGTGCCC GCTGGCTCGG TGGTGGTCAG CGGCAACCTG
CCCAAGGACG GTGGCCGCTA CAGCATGTAC GCGGCCATCA TCGTCAAGAA GGTGGACGCC
AAGACCCGCT CCACCACCAG CCTGAACGAC CTGCTGCGCG ACTGA
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| Protein sequence | MTQQLQTLID NAWDNRASLS PSAAPKEVVD AVEHVIAELN NGRLRVATRE GVGQWTVHQW
IKKAVLLSFR LKDNELMKAG DLGFFDKVPT KFAHLSADEM AATGVRVVPP AVARRGSFIA
KGAILMPSYV NIGAYVDEGT MVDTWATVGS CAQVGKNVHL SGGVGLGGVL EPLQANPTII
EDNCFIGARS EVVEGVIVEE NSVISMGVYI GQSTPIYDRT TGEITYGRVP AGSVVVSGNL
PKDGGRYSMY AAIIVKKVDA KTRSTTSLND LLRD
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