| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2050 |
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| Symbol | |
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| ID | 4671436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2160751 |
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| End bp | 2161761 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639839128 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_986302 |
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| Protein GI | 121594406 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.692281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.771105 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATCC GCTTTGCTCT TGCCGGCCTC GTGGCCGCAC TCGTTGCCAC CGGCGCTGCA
CAGGCGCAGG ACTTCAAGCC GCGCATCGTG CGTTTCGGCT ATGGCCTGGT GGACAACTCC
AACCAGGGCC GCGCGGCCCG CATGTTTGCG CAAGAGGTGG AAAAGGCCAC CGGTGGCAAG
ATGAAGGTGC GTGCCATTGG TAACGCCTCG CTGGGCTCCG ACACGCAGAT GCAGCAGGCG
CTGATCGGCG GCGCGCAGGA GATGATGGTG GGCTCCACCG CCACGCTGGT GGGCCTGGTG
CCGGAGATGG CCGTGTGGGA CACGCCGTTC CTCTTCAGCA ACGCCAAGGA AGCCGATGTG
GTGCTGGACG GCCCCGTGGG CGACAAGATC AAGGCCAAGC TGGAAGCCAA GGGCATGGTG
GGCCTGGTGT ACTGGGAGAA CGGTTTCCGT AACCTCACCA ACAGCAAGCG CCCCGTCGCC
AAGCTGGAAG ACCTGAGCGA CATCAAGCTG CGCGTGATGC AGAACAACGT GTTCCTCGAC
AGCTTCAAGG CCCTGGGCGC CAACGCCGTG CCGCTGCCGT TTTCCGAGCT GTTCACCGCG
TTGGAAACGC GCGCCGTGGA CGGCCAGGAG AACCCCTACA ACACCATCGT CTCCAGCAAG
TTTTACGAGG TGCAGAAGTA CCTCACGGTG ACCAACCACG TGTACAGCCC CTGGATCGTC
ACGGTGAGCA AGAAATGGTG GGACGGCCTG TCCGCCGCCG AAAAGAAGGT GCTGCAGGAC
GCCGCCATCA AGAGCCGCGA CTTCGAGCGC AAGGACACAC GTGAAGAGGC CGCCAAGGCC
CTGGCCGACC TGAAAGGCAA GGGCATGCAG GTCAACGAGC TGTCGGCCGC CGAGGCCAAC
CGCATGCGCG AAAAGCTGGT CAGCGTGAAC GCGGGCATCG CCAAGTCGGT GGGCCAGCAG
ACCTGGGACG AGGTGAACGC CGCCGTCCAG CAGGCGCGCA ACGCCAAGTA A
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| Protein sequence | MRIRFALAGL VAALVATGAA QAQDFKPRIV RFGYGLVDNS NQGRAARMFA QEVEKATGGK
MKVRAIGNAS LGSDTQMQQA LIGGAQEMMV GSTATLVGLV PEMAVWDTPF LFSNAKEADV
VLDGPVGDKI KAKLEAKGMV GLVYWENGFR NLTNSKRPVA KLEDLSDIKL RVMQNNVFLD
SFKALGANAV PLPFSELFTA LETRAVDGQE NPYNTIVSSK FYEVQKYLTV TNHVYSPWIV
TVSKKWWDGL SAAEKKVLQD AAIKSRDFER KDTREEAAKA LADLKGKGMQ VNELSAAEAN
RMREKLVSVN AGIAKSVGQQ TWDEVNAAVQ QARNAK
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