Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2039 |
Symbol | |
ID | 4671966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 2147015 |
End bp | 2147650 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639839117 |
Product | GntR family transcriptional regulator |
Protein accession | YP_986291 |
Protein GI | 121594395 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCCG TCACCCTCAC TCCCCGCGCA CTCTATGAAC AAGTGGCGGA GCAACTGCGC CAGCGCATCT TCCGGCGCGA GCTGGAGCCT GGCAGCTGGA TCGACGAGCT GAAGATCGCC GAGGAGTTCG GCATCAGCCG CACGCCTTTG CGCGAAGCAC TCAAAGTGCT GGCGGCGGAA GGCCTGGTCA CCATGAAGGT GCGCCGCGGC GCCTACGTGA CCGAGATGTC CGACAAGGAC CTGCACGATG TCTACCACCT GCTCAGCCTG CTGGAGAGCG ACGCCGCAGG CGTGGTGGCC GCCCGTGCCA CGCCGGAGCA ACTGCGCGAA CTGGAGCAGC TGCATGCCGA CCTGGCCGCC GCCGTGCAGG ACCGCGACCG CTTCTTCACC ATCAATGAGC GCATCCACAT GCGCCTGCTG GAGATGGCCG ACAACCGCTG GCGCAGCCAG ATGGTGGCCG ACCTGCGCAA GGTCATGAAG CTCAACCGCC ACAACTCGCT GCTCAAGCAG GGACGCATCG AGGATTCGGT GGCCGAGCAC GAAACCATCC TGGCCGCGCT GCGCGCGCGC GACCCGCAGG CCACCGTGGC CGCCATGTCC GCGCATTTCG CGCATGGGCT GGAGGCAGCG GGCTGA
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Protein sequence | MSAVTLTPRA LYEQVAEQLR QRIFRRELEP GSWIDELKIA EEFGISRTPL REALKVLAAE GLVTMKVRRG AYVTEMSDKD LHDVYHLLSL LESDAAGVVA ARATPEQLRE LEQLHADLAA AVQDRDRFFT INERIHMRLL EMADNRWRSQ MVADLRKVMK LNRHNSLLKQ GRIEDSVAEH ETILAALRAR DPQATVAAMS AHFAHGLEAA G
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