Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2015 |
Symbol | |
ID | 4672900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 2116689 |
End bp | 2117303 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639839093 |
Product | isochorismatase hydrolase |
Protein accession | YP_986267 |
Protein GI | 121594371 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.278156 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGCCA TGCTGCTTGA CGCCTCCGAA TCCCAACTCG TTCTCGTGGA TTACCAGGAA CGCCTGATGC CCGCCATCTT CGAGGCAGAA GCCGTACTGG CCAACGCGCG CAGGCTGGCG CAGATTGCCA GGCTGATGGA CGTGCCGGTG TGGGGCACGG AGCAGAACCC TTCGCGCCTG GGACTCAACG ACGCCGCGTT GCGCGCGCTG TGCCAGCGCA CCTTGTCCAA GATGCACTTC AGCGCCACCG AGGAGGGCCT GGGCGAGTGG CTGCGCCCGC CCGCCAAGGC CCAGGGCGGC AATGCGCGCA GCCTGCCCAA GCATCTGCAA AAGGGCCGCG AGCCCCAGGC GCCGGAGCGC GCCACCATCG TGGTGGCCGG CTGCGAGGCC CATGTCTGCC TGCTGCAGAC GGCGCTCGAT CTGCTGGAGG ATGAGTTCGA GGTGTGGGTG GTGACGGACG CCTGCAGCTC GCGCACGGAG CGCAACCGCG ACGCCGCCTT CGACCGACTG GCCGGCGCCG GCGCCGAGCT GGTAACCACC GAGATGGTGG CCTTCGAGTG GCTGCGCAGC TGCGAGCACC CGGCATTCAA GGAGATGCTG GCCTTGGTCA AATAG
|
Protein sequence | MTAMLLDASE SQLVLVDYQE RLMPAIFEAE AVLANARRLA QIARLMDVPV WGTEQNPSRL GLNDAALRAL CQRTLSKMHF SATEEGLGEW LRPPAKAQGG NARSLPKHLQ KGREPQAPER ATIVVAGCEA HVCLLQTALD LLEDEFEVWV VTDACSSRTE RNRDAAFDRL AGAGAELVTT EMVAFEWLRS CEHPAFKEML ALVK
|
| |