Gene Ajs_2015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2015 
Symbol 
ID4672900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2116689 
End bp2117303 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content68% 
IMG OID639839093 
Productisochorismatase hydrolase 
Protein accessionYP_986267 
Protein GI121594371 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.278156 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA TGCTGCTTGA CGCCTCCGAA TCCCAACTCG TTCTCGTGGA TTACCAGGAA 
CGCCTGATGC CCGCCATCTT CGAGGCAGAA GCCGTACTGG CCAACGCGCG CAGGCTGGCG
CAGATTGCCA GGCTGATGGA CGTGCCGGTG TGGGGCACGG AGCAGAACCC TTCGCGCCTG
GGACTCAACG ACGCCGCGTT GCGCGCGCTG TGCCAGCGCA CCTTGTCCAA GATGCACTTC
AGCGCCACCG AGGAGGGCCT GGGCGAGTGG CTGCGCCCGC CCGCCAAGGC CCAGGGCGGC
AATGCGCGCA GCCTGCCCAA GCATCTGCAA AAGGGCCGCG AGCCCCAGGC GCCGGAGCGC
GCCACCATCG TGGTGGCCGG CTGCGAGGCC CATGTCTGCC TGCTGCAGAC GGCGCTCGAT
CTGCTGGAGG ATGAGTTCGA GGTGTGGGTG GTGACGGACG CCTGCAGCTC GCGCACGGAG
CGCAACCGCG ACGCCGCCTT CGACCGACTG GCCGGCGCCG GCGCCGAGCT GGTAACCACC
GAGATGGTGG CCTTCGAGTG GCTGCGCAGC TGCGAGCACC CGGCATTCAA GGAGATGCTG
GCCTTGGTCA AATAG
 
Protein sequence
MTAMLLDASE SQLVLVDYQE RLMPAIFEAE AVLANARRLA QIARLMDVPV WGTEQNPSRL 
GLNDAALRAL CQRTLSKMHF SATEEGLGEW LRPPAKAQGG NARSLPKHLQ KGREPQAPER
ATIVVAGCEA HVCLLQTALD LLEDEFEVWV VTDACSSRTE RNRDAAFDRL AGAGAELVTT
EMVAFEWLRS CEHPAFKEML ALVK