Gene Ajs_2008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2008 
Symbol 
ID4673199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2110767 
End bp2111195 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content72% 
IMG OID639839086 
Producthypothetical protein 
Protein accessionYP_986260 
Protein GI121594364 
COG category[S] Function unknown 
COG ID[COG3755] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.138138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGAT GCGTGAAACC CCATGCCGCC CGCCTGCGCA CCTTGGCCGC TGCGTGCGCC 
CTGTTGGCTG CCACCCAGGC ACAGGCGCAG GCCGGCGCTG CCTGCCGCCC CGGCGGCACG
GTGGATGAGA CCAACGCCTG CGCCGTGCAG CGCTACCAGG AGGCGGACAC CGCCACTCAG
ATTCTGTATG GCGATGTGAT GCGTGCCCTG TCGGCCCACG AGCGCCCTGC CCTGCGCCAG
GACCAGGCCG CCTGGCAGCG CACGCGCGCC GCGCAGTGCA AGCAGGCGCA GCGCGCGGCG
GAGTCCCGCC CCGAATGGCC GCGGCTGTAC CACGACTGCC TGACGGTCCA TACCCAGGCG
CGGCGCGATG CCCTGATGCA CTGGCTGCAC CATGGCGAGG CCCCGCAGCC CACGACGAAC
AAGCCATAA
 
Protein sequence
MTRCVKPHAA RLRTLAAACA LLAATQAQAQ AGAACRPGGT VDETNACAVQ RYQEADTATQ 
ILYGDVMRAL SAHERPALRQ DQAAWQRTRA AQCKQAQRAA ESRPEWPRLY HDCLTVHTQA
RRDALMHWLH HGEAPQPTTN KP