Gene Ajs_2003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2003 
Symbol 
ID4673405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2104939 
End bp2106291 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content42% 
IMG OID639839081 
Producthypothetical protein 
Protein accessionYP_986255 
Protein GI121594359 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.189091 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.4485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGTTTG GCACTAAAGG CGCCGGGAAG AGTGCACTTT ACACCCTGCT TTTTAACGAC 
TCCGATCAAT TGGGGCGCGA GGGCATTACG CTAATCTCTG CAGAGAAGCC TACTGGACAA
ACAGTATTTT CAGAAATAAA AAATACCCCT CCCACCACGG AAGCAGAATT TGTAACCCTG
TGGAAGATAT ATATATGCCA GTTAATTGTG CAGCAGCTAC AGGAAAGCGG AAGCTGCACG
GATCATGCGT TAGAGGTTAA GGAAAAATTG ATTGAAGCAG GGTTAATCGA AGAGAAAAAT
ACATTAAAGA GATTCGTCAA TTCGGCTATG AATTTTGCTC GCCGGATAAT TGATGTTGAA
TCCATCGAAG GCGGAGCGAC ACCAGATGGA ACTATCATTA CAGGAAAAAT AACATTCAGA
ACCCCAACGG CAGAAAAACG AAAGCTTGGC TTCGTTTCAG TGGATGAGTT ACTTGAAATT
CTAAACGATC ATTTATCTGA GAAAGCACTA AAATATTGGC TGCTATTCGA TAGACTCGAT
GTTGCATTTG ATCAGGATGC GGATTTGGAG AAAAATGCAC TGCGAGCACT TTTCAAGACG
TATAGGGACA TTGAAAATCT AGATGCGATA TCTCTCAAAA TATTCCTCCG GGACGATATA
TGGAAGAGGA TTACCGATGA GGGATTCCGG GAGTCCAGTC ACATAACCCG AACAACAACT
ATAAGCTGGT CCCCTCAAAG TTTACTGAAT TTAATAATTT TGCGCGCAAT AAGAAACGAT
AAAATCACAC AAGACTATAA AGTCAATGCA AGTCAAATAG CTCAAAGTCA CGCAGAGCAA
AGATCTCTAT ACTATAAAAT ATTTCCAGAG CAAGTTGATG TTGGCGAAAA GCAGTCGGAT
ACATTTGACT GGATTTTGAA TCGAGTTAGA GATGGATTTG GTAATGCCGC ACCCCGAGAA
GTCATCCACT TTCACAACGA GGTTGTTAAT TGTGAAAATG AGGCGATATC AATTGGTGCC
AGCAAGGCGG AATCGCCAAA TATGTTTAGC CGTCCCTCTG TCAAAGCTGC AACATTAGAG
GTATCGAAAG TAAGGACTGA GCAAAATCTA TTCGCAGAAA ATGCACACCT GAAACAATAT
ATACAAAAAC TTGATGGAAA TAAGGCGGAA CAGAACTTGG AGACTCTTTC AAATTTGTGG
GGAAAGAATA TGGAAGAGAC TAAATTGGTT GCCGCAGAGT TGGTTTTTGT GGGATTTTTC
GAGCAACGGG CGGCTAGGGA TGAAGGCGTT TATAAAATTC CATTCATGTA TCGTCCATAC
CTGCGAGTAA CGCAAGGCAA AGCGTTCTCA TAA
 
Protein sequence
MVFGTKGAGK SALYTLLFND SDQLGREGIT LISAEKPTGQ TVFSEIKNTP PTTEAEFVTL 
WKIYICQLIV QQLQESGSCT DHALEVKEKL IEAGLIEEKN TLKRFVNSAM NFARRIIDVE
SIEGGATPDG TIITGKITFR TPTAEKRKLG FVSVDELLEI LNDHLSEKAL KYWLLFDRLD
VAFDQDADLE KNALRALFKT YRDIENLDAI SLKIFLRDDI WKRITDEGFR ESSHITRTTT
ISWSPQSLLN LIILRAIRND KITQDYKVNA SQIAQSHAEQ RSLYYKIFPE QVDVGEKQSD
TFDWILNRVR DGFGNAAPRE VIHFHNEVVN CENEAISIGA SKAESPNMFS RPSVKAATLE
VSKVRTEQNL FAENAHLKQY IQKLDGNKAE QNLETLSNLW GKNMEETKLV AAELVFVGFF
EQRAARDEGV YKIPFMYRPY LRVTQGKAFS