Gene Ajs_2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2000 
Symbol 
ID4673498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2102288 
End bp2102626 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content67% 
IMG OID639839078 
Producthypothetical protein 
Protein accessionYP_986252 
Protein GI121594356 
COG category[S] Function unknown 
COG ID[COG3171] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.267293 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.17767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTGC CACCCAACAA GCAACGCAGC CGCCGCCTTC GCAAGAAGAT GCGCGTGGCC 
GAGTTTCAGG AATTCGGCTT CGAGTACGAG CTGAAGGTCA AGCAGGAGCT GACGCCCGAG
CAAGAGGAGG CGCTGATGGA CCGCTTCGTG CGGGACCTGC TGGTGCCCCG CAATCTGGCG
GCCGCCGGCT GGGTGCGTGA AGGCTTCGTG ACGGCCTTCG TGCGCGGCTC CGCCACCGAG
GACGACCGCC AAGCCACGCA GGCCTGGCTG GCTGCACAGC CCGAGGTGGC CGAGGCCACG
GTGAGCGAGC TGAAGGACGC CTGGTACGTG CAAGACTGA
 
Protein sequence
MALPPNKQRS RRLRKKMRVA EFQEFGFEYE LKVKQELTPE QEEALMDRFV RDLLVPRNLA 
AAGWVREGFV TAFVRGSATE DDRQATQAWL AAQPEVAEAT VSELKDAWYV QD