Gene Ajs_1999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1999 
Symbol 
ID4673521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2100944 
End bp2102002 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content67% 
IMG OID639839077 
Productgluconolactonase 
Protein accessionYP_986251 
Protein GI121594355 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.799768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.270906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCACG AGAAGAATGC GGCGCCCGGC GTTGCCACGC GGCGCCATTT CCTGGCCGGC 
GCTGTGGCCG CCACGGCCGC AGGTGCTGCC ACGGCGCAGA GTTTTGAATT CAAGCCCCAG
CAGCGTTACC CCGACCCATC GGTGCAGGTG CTGGACCCGC AGTTCGCCAA GTACCGCATC
TACAGCAGCA GCGTGGAGCA GATTGCCACC GGCATGCGTT GGGCCGAAGG GCCCGTGTGG
TTCGGGGACG GGCGCTACCT GCTGGTATCC GACATTCCGA ACAACCGCAT CATGCGCTGG
GATGAGGCCA CCGGTGCGTG GGGCGTATTC CGCCAGCCCT CCAACTTTTC CAACGGCCTC
GCGCGCGACC GCCAGGGCCG GCTGCTGACC TGCGAGCACC TGACGCGCCG TATCACGCGC
ACCGAGTACG ACGGAAGCAT CACCGTGCTG GCCGATGGCT ACAACGGCAA GCGCTTCAAC
TCACCCAACG ACATCATTTG CAGCAAGGAC GGCGCGGTCT GGTTCACCGA CCCGCCGTTC
GGCATCGCCG GTCATTGGGA GGGCGAAAAG GCCGCGCCAG AGCTGCCGCA CGGCGTCTAC
CGCATCGACC CGGCCGGCGC AAAGGTCAGC CAGGTGCTGG GCGACCTGGC GGGTGCCAAT
GGCCTGTGCT TTTCGCCCGA TGAGAAGGTG CTCTACATCG TCGAGGGCCG CCACCAGCCG
CATCGCGTGG TGTGGGCCTA CGACGTGGGC CCGGGCGGGC GGCTGTCCGG CAAGCGTCTG
CACATCGACG CGGGCGGCCC GGGTGCCCTG GACGGCATCA AGTGCGACGA GTTCGGCAAC
CTCTGGTGCG GATGGGGCAG CAACGGCGCC GTGGGCGCCA ACCCGGCGGA CCTGGATGGC
GTGATGGTCT TCAACCCCGA AGGCAAAGCC ATTGGCCACA TCCGGCTGCC TGAGCGTTGT
GCCAACCTGT GTTTTGGGGG TGCCAAGAAC AACCGCCTGT TCATGGCCAG CAGCCATTCG
ATCTACGCGC TTTACGTGGA GGCGCGCGGC GCTGTCTGA
 
Protein sequence
MPHEKNAAPG VATRRHFLAG AVAATAAGAA TAQSFEFKPQ QRYPDPSVQV LDPQFAKYRI 
YSSSVEQIAT GMRWAEGPVW FGDGRYLLVS DIPNNRIMRW DEATGAWGVF RQPSNFSNGL
ARDRQGRLLT CEHLTRRITR TEYDGSITVL ADGYNGKRFN SPNDIICSKD GAVWFTDPPF
GIAGHWEGEK AAPELPHGVY RIDPAGAKVS QVLGDLAGAN GLCFSPDEKV LYIVEGRHQP
HRVVWAYDVG PGGRLSGKRL HIDAGGPGAL DGIKCDEFGN LWCGWGSNGA VGANPADLDG
VMVFNPEGKA IGHIRLPERC ANLCFGGAKN NRLFMASSHS IYALYVEARG AV