| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1990 |
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| Symbol | |
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| ID | 4673726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2090402 |
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| End bp | 2091739 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639839068 |
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| Product | glucarate dehydratase |
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| Protein accession | YP_986242 |
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| Protein GI | 121594346 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.202051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACAGA CTCCCACCAT CACCGAGATC GAAGTCATCC CCGTCGCCGG GCGCGACGGC
ATGTTGATGA ACCTCAGCGG CGCGCACGCG CCCTTCTTCA CACGCAACGT GGTGCTGATT
CATGACAGCG CGGGTCGCAC CGGCGTGGGG GAAGTCCCCG GTGGCGAAGG CATCCGCCGG
GCGCTGGAGG ACAGTCGCGG CGTGCTCATC GGCCGCTCCA TTGGTGAGCG CCTGCAGTTG
CTGCAGCAGG TGCAAAAGAC CCTGGAAGGG CGTGACCCTG GTGGGCGCGG CCTGCAAACC
TTCGACCTGC GCGTTGGCGT GCACGCCGTG ACGGCCATCG AATCCGCACT GCTGGACCTG
CAGGGCCAGT ACCTGGGCGT GCCCGTGGCG GCGCTCCTGG GCGAAGGCCA GCAGCGCGAG
CGCGTGGAGA TGCTGGGCTA TCTGTTCTTC GTGGGGCCGT CGCACAAGAC CGGTAAACCC
TACGTGCAGG CGGGAGAGGA CCGTTCAGGC ACCGACGATT GGCACCAGGT ACGCCACATG
GAGGCCATGA CGCCGGACGC CATCGTGCGC CAAGCCGAAG CCGCGCACGC GCGCTACGGC
TTCAACGACT TCAAGCTCAA GGGCGGCGTG CTGGCCGGCG AGCAGGAGGT CGAAGCCGTC
ACTGCACTGG CTCAACGTTT TCCGCAGGCG CGCGTCACGT TGGACCCCAA CGGCGGCTGG
CTACTCAAGG ACGCGATCCG CCTGATGCGC GACATGCGCG GTGTGCTGGC CTATGCCGAA
GACCCCTGCG GCGCCGAAGG GGGTTTCTCG GGCCGCGAGG TCATGGCTGA ATTCCGCCGT
GCCACCGGCC TGCCCACGGC CACCAACATG GTCGCCACCG ACTGGCGCCA GATGGTGCAC
GCCCTGTCGC TGCAGTCCGT GGACATCCCG CTGGCCGACC CCCATTTCTG GACCATGGCC
GGCTCCGTGC GCGTGGGCCA GACCTGCCGC GACTGGGGCC TGACCTGGGG CTCGCATTCC
AACAACCACT TCGACATCTC GCTGGCCATG TTCACCCACG TGGCGGCCGC CGTTCCGGGC
AAGGTCACGG CCATCGACAC GCACTGGATC TGGCAGGACG GGCAGTTCCT CACCCAGAAC
CCACTGCAGA TCCGTGGCGG CTTCGTCGAC GTGCCCAAGA CCCCGGGCCT GGGCGTGACG
GTGGACCGCG CCGCACTGCA GCGCGCGCAT GCGCTGTACC AGGAACACGG CCTGGGCGCG
CGCGACGACG CCATCGGCAT GCAAAGCCTG ATTCCGGGCT GGCAGTTCGA CCCCAAGCGG
CCCTGCATGG TGCGCTGA
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| Protein sequence | MSQTPTITEI EVIPVAGRDG MLMNLSGAHA PFFTRNVVLI HDSAGRTGVG EVPGGEGIRR
ALEDSRGVLI GRSIGERLQL LQQVQKTLEG RDPGGRGLQT FDLRVGVHAV TAIESALLDL
QGQYLGVPVA ALLGEGQQRE RVEMLGYLFF VGPSHKTGKP YVQAGEDRSG TDDWHQVRHM
EAMTPDAIVR QAEAAHARYG FNDFKLKGGV LAGEQEVEAV TALAQRFPQA RVTLDPNGGW
LLKDAIRLMR DMRGVLAYAE DPCGAEGGFS GREVMAEFRR ATGLPTATNM VATDWRQMVH
ALSLQSVDIP LADPHFWTMA GSVRVGQTCR DWGLTWGSHS NNHFDISLAM FTHVAAAVPG
KVTAIDTHWI WQDGQFLTQN PLQIRGGFVD VPKTPGLGVT VDRAALQRAH ALYQEHGLGA
RDDAIGMQSL IPGWQFDPKR PCMVR
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