Gene Ajs_1988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1988 
Symbolaat 
ID4674129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2089081 
End bp2089845 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content67% 
IMG OID639839066 
Productleucyl/phenylalanyl-tRNA--protein transferase 
Protein accessionYP_986240 
Protein GI121594344 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2360] Leu/Phe-tRNA-protein transferase 
TIGRFAM ID[TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.068001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTGCCT GCATGACCAC ATCGCTTCCC TGGCTGGAGC CCGACGATCC TTTTCCACCC 
ACCGACGGTG CCTGGGGCAC GGACTCTCCC GCGCCCGGCC TGCTGGCCGC GGGCGGCACG
CTGGGGGTGC CCCGCCTGGT GCAGGCCTAT GCCCAGGGTG TCTTTCCGTG GTTCAGCACC
GGCCAGCCCA TCCTGTGGTG GAGCCCGGAC CCGCGCATGG TGCTGCATGT GCAGGAATTC
CGCCTGCATC GATCGCTGCG CCGCGTGCTG CAGCGCTTTC GCGCCACGCC CGGTTGCGAG
GTGCGCATCG ACAGCGACTT TTCCGCCGTG ATCCACGCCT GCGCCAACAA GCCGCGGGCC
GGGCAGTCCG GCACCTGGAT CGTGCCCTCC ATGGTTGCCG CGTATGAGGC GCTGCATGCT
GCTGGCCATG CCCATAGCGT GGAAACCTGG GTGAACGGGC AACTGGTGGG GGGGCTTTAT
TGCGTGGCGC TAGGACGGGC CGTGTTTGGC GAATCGATGT TCGCGCACGC GACCGATGCT
TCCAAGATCG CCCTGGCGGC GCTGGTATGC CTGTGCCGGC GCGAGGGGGT CCGGTTGATC
GACTGCCAGC AGAACACGGG CCATCTGGCC TCGCTGGGCG CCCGGGAGAT GGAACGTTCG
CAGTTTCTGA ATCACGTGGC GCGAGCGCGG CAAGACCCTG CCTGCACCTG GAAATTCGAG
CCCGTATACT GGACCGAGCT TTTGCCCAAC CCCTCAGCGG CGTGA
 
Protein sequence
MIACMTTSLP WLEPDDPFPP TDGAWGTDSP APGLLAAGGT LGVPRLVQAY AQGVFPWFST 
GQPILWWSPD PRMVLHVQEF RLHRSLRRVL QRFRATPGCE VRIDSDFSAV IHACANKPRA
GQSGTWIVPS MVAAYEALHA AGHAHSVETW VNGQLVGGLY CVALGRAVFG ESMFAHATDA
SKIALAALVC LCRREGVRLI DCQQNTGHLA SLGAREMERS QFLNHVARAR QDPACTWKFE
PVYWTELLPN PSAA