Gene Ajs_1983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1983 
Symbol 
ID4674328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2084865 
End bp2085968 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content72% 
IMG OID639839061 
ProductFAD dependent oxidoreductase 
Protein accessionYP_986235 
Protein GI121594339 
COG category[R] General function prediction only 
COG ID[COG3380] Predicted NAD/FAD-dependent oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.460512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCT TTTCCTCCCG CTCCAGCGAT CGACTGAAAC AAGGCCAGCA GGTCGCGCCC 
CTGGGCGCCG CGCGGCGCTT TGCCGTGGTG GGTGCCGGCA TGGCCGGCGT GGCCTGCGCC
CGCACCCTGG CCCAGGCGGG CCACATGGTC ACCGTCTTCG AGAAGGCGCC GCAGCCCGGC
GGGCGCACGG CGGCGCTGGC GTCGCCCTTT GGCAGTTTTG ATTCGGGCGC GCAGTACTTC
ACGGTGCGCG ACGCACGCTT TCAGCGGGCG CTGGACACCG TTTCCGGCCT GTGCCGCGCC
TGGAGTGCCA CCACCATCCG CGTGCTGGAC GCCGCCGGGC GCGTCGCCAC CGCCGCGCCA
CCGCCCGGTG AAGCGCACTG GGTGGCCGCC CCCGCCATGG ATGCGCTGGT CCAGGCCTGG
GCGGCACCAC TGGCGCGCGA AGGCCACCTG CACACGCGCA CGGCCGTCAC GCGCATCGAG
CGCGACGCCA TGCGGCCCAC GGCCTGGCAG CTGCGCACCG AGACGCTGGA TGGGGGATCG
CAGGTGTATG CGGGTTTCGA TGGCGTGGTA CTGGCCCAGC CCGCACCGCT GTCGCGGGCG
CTGCTGCAGC AGTCCGGCGT TTCCACGCCG TGGGACGATG CCCTGGCCGG CGTGGACATC
GCGCCCTGCT GGACCTTGAT GCTGGCCTTT GCGCAGGCCG TGCGCCCCGG GCTGACCACG
CTCGGTCCGC AGTGGAACGC CGCACGCAGT ACGCACCACC GCATTGCCTG GCTGGCCCGA
GAGTCCAGCA AGCCCGGCCG GACACAGATC GAGCGCTGGA CGGTGCAGGC CAGTCCCGCC
TGGTCGCTGG AGCACCTGAA CGACGAGGCC CCCCGCGTGC AGGCCAAGCT CATCAAGGCG
TTTGCCGAAG TCACCGGCAT ACGCGCCACG CCCACGCATG CCGAGATGCG GCGCTGGCGC
CACGCGCAGA CGCAAAAGCC CTTGGGCCAG AGCTTTCTGT GGGACGCCTC CCTGGGCCTG
GGCGTTTGCG GGGATTGGTG CCTGGGGCAC CGGCTGGAAG ACGCTTTCGT CTCGGGCCTG
GAGCTCGCGC TCACCGCTGC ATGA
 
Protein sequence
MTRFSSRSSD RLKQGQQVAP LGAARRFAVV GAGMAGVACA RTLAQAGHMV TVFEKAPQPG 
GRTAALASPF GSFDSGAQYF TVRDARFQRA LDTVSGLCRA WSATTIRVLD AAGRVATAAP
PPGEAHWVAA PAMDALVQAW AAPLAREGHL HTRTAVTRIE RDAMRPTAWQ LRTETLDGGS
QVYAGFDGVV LAQPAPLSRA LLQQSGVSTP WDDALAGVDI APCWTLMLAF AQAVRPGLTT
LGPQWNAARS THHRIAWLAR ESSKPGRTQI ERWTVQASPA WSLEHLNDEA PRVQAKLIKA
FAEVTGIRAT PTHAEMRRWR HAQTQKPLGQ SFLWDASLGL GVCGDWCLGH RLEDAFVSGL
ELALTAA