| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1980 |
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| Symbol | |
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| ID | 4674545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2082120 |
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| End bp | 2083124 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639839058 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_986232 |
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| Protein GI | 121594336 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.664985 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCCA TCCTCCAGAA CCTGGCCGAA ATGACCGCCC ACCGGGACCA CTTGCGCCTG
GAGGTCTCGG TGCTGTCCAC GCTGCTCAAG CTGGGCCATA TCGTGCAGGT GCGGGCGCTG
GAGCTGTTCA CGCAGGACGA AGTCCTGATG CTGCGCCCGC GCAGCTGGAG CCACGAAGGG
CAGTTAGTCT CCAGTGAGTA CGACGCTGCT TCAGATCCCC AGCGCATTCC GCTGGCGCAA
GAGCCTGAAC TGGCCCACTG CATCGCCACC CAGGGCGAGA GCGCCGCGCG TGCCTCCGAG
CAGCGCCACA CGCTCTGGCT GCCCATGTGG CTGGGCGGGC GCCCCACGGC GTGCCTGGAA
ATCACCCAGT CCCGCCGCTT CACGCGGCAC CAGCGCGACG TGATCATGGG CGTGTTTCTG
GTCTACCAAA ACTACCAGAG CCTGCTGGAT TACAGCGAGC GGGACGCGCT CACCGGGCTG
CTGAACCGCA AGACCTTCGA GGAGCAGTTC TCACGACAGA CCGGCGCACC CGCCAGCCCA
GGCGAGGGCG AAGACACTGT GCGCCAATGG CTGGCGGTGA TCGACATCGA CCATTTCAAG
TCGGTCAATG ACCGCTTTGG ACACCTCTAT GGCGATGAGG TGCTGATCCT GGTGGCCAAC
CGCCTGCGCA CGCAGTTCCA GAGCCAGGAC AGCATCTTCC GCTTCGGCGG GGAGGAGTTC
GTGGTGCTGC TGCGTTCCCT CACGCTGGCG CAGGCGCGCC AGGCGCTGGA GCGGTTGCGC
GCGGCCGTGC AGACGCATGT GTTCCCGCAG ATCGGACACA TCACCGTGAG CATCGGCTTC
GCGGCCACGC AACAGGGCTC GCCGGTGGAG ATCCTGGGGC GCGCGGACCA GGCGCTCTAC
TATGCCAAGG AACATGGACG CAACCAGGTC TGCTTCTATG AAGATCTGGT CAACAATGGC
GCCTTGCAGA TCAAGGTGGC GCACGACGAA GTGGAGCTGT TCTAG
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| Protein sequence | MKPILQNLAE MTAHRDHLRL EVSVLSTLLK LGHIVQVRAL ELFTQDEVLM LRPRSWSHEG
QLVSSEYDAA SDPQRIPLAQ EPELAHCIAT QGESAARASE QRHTLWLPMW LGGRPTACLE
ITQSRRFTRH QRDVIMGVFL VYQNYQSLLD YSERDALTGL LNRKTFEEQF SRQTGAPASP
GEGEDTVRQW LAVIDIDHFK SVNDRFGHLY GDEVLILVAN RLRTQFQSQD SIFRFGGEEF
VVLLRSLTLA QARQALERLR AAVQTHVFPQ IGHITVSIGF AATQQGSPVE ILGRADQALY
YAKEHGRNQV CFYEDLVNNG ALQIKVAHDE VELF
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