| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1979 |
|---|
| Symbol | alaS |
|---|
| ID | 4674560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 2079348 |
|---|
| End bp | 2081972 |
|---|
| Gene Length | 2625 bp |
|---|
| Protein Length | 874 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639839057 |
|---|
| Product | alanyl-tRNA synthetase |
|---|
| Protein accession | YP_986231 |
|---|
| Protein GI | 121594335 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0013] Alanyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAC CGACTTTCTC CGTTGCAGAC ATTCGCAAGA CCTTCCTGGA CTTCTTCGCC
GCCAAGGGGC ATACCGTGGT GGCGTCCAGT CCGCTGGTGC CGGGCAACGA CCCCACGCTG
ATGTTCACCA ACTCGGGCAT GGTGCAGTTC AAGGATGTGT TCCTGGGTAC GGACAAGCGC
CCCTATGTGC GCGCCACATC GGTGCAGACC TGCCTGCGCG CCGGCGGCAA GCACAACGAT
CTGGAGAACG TGGGCTACAC CGCGCGCCAC CACACGTTCT TCGAGATGCT GGGCAACTGG
AGCTTTGGCG ACTATTTCAA GCGCGAGTCG CTCAAGTGGG CCTGGGAGCT GCTGACCGAG
GTCTACAAGC TGCCTCCCGA GCGCTTGCTG GCCACGGTCT ACGCCGAGGA CGACGAGGCC
TACGACATCT GGACCAAGGA AATCGGCCTG CCGCCCGAGC GTGTGATCCG CATCGGCGAC
AACAAGGGCG GCCGCTACAA GAGCGACAAC TTCTGGATGA TGGCCGACAC CGGCCCCTGC
GGCCCGTGCT CGGAGATCTT CTACGACCAC GGCGAGCACA TTGCCGGCGG CCCCCCGGGC
AGCCCGGATG AGGACGGCGA CCGCTTCATC GAAATCTGGA ACAACGTGTT CATGCAGTTC
GACATGGACG AGCAAGGCAA CGTCAAGCCG CTGCCCGCAC CCTGCGTGGA CACCGGCATG
GGCCTGGAGC GCCTGGCCGC CATCCTGCAG CACGTGCACA GCAACTACGA GATCGACTTG
TTCGACGCGC TGATCAAGGC CGCGGCGCGC GAAACAGGCA CAAGCGACCT GACCAACCCG
TCGCTCAAGG TCATCGCCGA CCACATCCGC GCCACCGCCT TCCTGGTCGC CGACGGTGTC
ATCCCCAGCA ACGAGGGCCG CGGCTACGTG CAGCGCCGCA TCGTGCGCCG CGCCATTCGC
CACGGCTACA AGCTGGGTCG CAAGACGCCG TTCTTCCACA AGCTGGTGCA AGACCTGGTG
CAGCAGATGG GCGATGCCTA CCCCAAGATC CGCGAGCAAC AGGCGCGCAT CACGGATGTG
CTGCGGGTGG AAGAGGAACG CTTCTTCGAG ACCCTGGCGC ACGGCATGGA GATTCTGGAC
AGCGCTTTGG CTGGCGGCGC CAAGACGCTG CCGGGCGACG TGGCGTTCAA GCTGCACGAC
ACCTATGGCT TCCCGCTGGA CCTGACGAAT GACGTGTGCC GCGAACGGGG CGTCAACGTG
GACGAAGCGG GCTTTGCCAC CGCCATGGAA CACCAGAAGA GCACTGCCCG CGCCGCAGGC
AAGTTCAAGA TGGACCGCGC GCTGGAATAC ACCGGCGCGG CCAACCAGTT CACGGGTTAC
GAGCAACTGG CCGAAAGTGC CAAGATCGTC GCGCTGTACG TGGACGGCAC CAGCACCGCA
GCCCTGCACG CGGGCCAGAG CGGCGTGGTG GTGCTGGACC GCACGCCGTT CTATGCCGAA
AGCGGCGGCC AGGTGGGCGA CCAAGGCACC ATCGGCGCTG GCTCGGCGTG CTTCACCGTG
GCCGACACGC AGAAAATCAA GGCCGACGTC TACGGCCACC ACGGCACGCT GGAAGCCGGC
ACGCTGAATG TGGGCGACAC GGTGCAGGCG CAGGTGGACC TGCAACTGCG CGCGGCCACC
ATGCGCAACC ACTCGGTCAC CCACCTCATG CACAAGGCGC TGCGCGAGGT GCTGGGCGAC
CATGTGCAGC AAAAGGGCAG CCTGGTGAAC GCCGAGCGCA CGCGCTTTGA CTTCGCGCAC
AACGCGCCGC TGACGGCCGC GCAGATTCGC GAGATCGAAC GCCTGGTGAA TGCCGAGGTG
CTGGCCAATA CCGACACCAA CGCGCGCCTG ATGGACATCG AAAGCGCGCA GAAAACGGGC
GCCATGATGC TGTTCGGCGA GAAGTACGGC GAGACCGTGC GTGTGCTGGA CATCGGCACC
AGCCGCGAGC TGTGCGGCGG CACGCACGTG CGCCGCACGG GCGACATCGG CCTGTTCAAG
GTGGTGGCTG AGGGCGGCGT GGCCGCGGGC GTGCGCCGCA TCGAGGCGGT GACCGGCGAG
AACGCGCTGG CCTACCTGCA GTCGCTGGAG TCCACGGTGG ACCAGGCTGC AGCCGCCCTG
AAGGCGCCCC CTGCGGAGCT GACCGCCCGC ATTGGCGGTG CGCTCGATCA GATCAAGACG
CTCGAGAAGG AACTGGCTGC ACTCAAGGGC AAGCTGGCTT CCAGCCAGGG CGACGAGCTG
GCCGGCCAGG CCGTGGACGT CAAGGGCATC AAGGTGCTGG CGGCCCGGCT GGAAGGCGCG
GACGCCAAGA CCCTGCGCGA GACCATGGAC AAGCTCAAGG ACAAGCTCAA GACGGCGGCC
ATCGTGCTGG CGGCCGTCGA TGGCGACAAG GTGCAGCTGG CGGCTGGCGT GACGGCCGAC
AGCATCGGCC GTGTCAAGGC CGGGGATCTG GTGAACTTCG TGGCGGCCCA AGTGGGTGGC
AAAGGGGGCG GAAAACCCGA CATGGCCATG GCCGGCGGCA CCAACGCGGC GGCGCTGCCG
CAGGCGCTGG CAGCCGTGCA GGGCTGGGTG GGCGAGCGCA TCTGA
|
|---|
| Protein sequence | MSTPTFSVAD IRKTFLDFFA AKGHTVVASS PLVPGNDPTL MFTNSGMVQF KDVFLGTDKR
PYVRATSVQT CLRAGGKHND LENVGYTARH HTFFEMLGNW SFGDYFKRES LKWAWELLTE
VYKLPPERLL ATVYAEDDEA YDIWTKEIGL PPERVIRIGD NKGGRYKSDN FWMMADTGPC
GPCSEIFYDH GEHIAGGPPG SPDEDGDRFI EIWNNVFMQF DMDEQGNVKP LPAPCVDTGM
GLERLAAILQ HVHSNYEIDL FDALIKAAAR ETGTSDLTNP SLKVIADHIR ATAFLVADGV
IPSNEGRGYV QRRIVRRAIR HGYKLGRKTP FFHKLVQDLV QQMGDAYPKI REQQARITDV
LRVEEERFFE TLAHGMEILD SALAGGAKTL PGDVAFKLHD TYGFPLDLTN DVCRERGVNV
DEAGFATAME HQKSTARAAG KFKMDRALEY TGAANQFTGY EQLAESAKIV ALYVDGTSTA
ALHAGQSGVV VLDRTPFYAE SGGQVGDQGT IGAGSACFTV ADTQKIKADV YGHHGTLEAG
TLNVGDTVQA QVDLQLRAAT MRNHSVTHLM HKALREVLGD HVQQKGSLVN AERTRFDFAH
NAPLTAAQIR EIERLVNAEV LANTDTNARL MDIESAQKTG AMMLFGEKYG ETVRVLDIGT
SRELCGGTHV RRTGDIGLFK VVAEGGVAAG VRRIEAVTGE NALAYLQSLE STVDQAAAAL
KAPPAELTAR IGGALDQIKT LEKELAALKG KLASSQGDEL AGQAVDVKGI KVLAARLEGA
DAKTLRETMD KLKDKLKTAA IVLAAVDGDK VQLAAGVTAD SIGRVKAGDL VNFVAAQVGG
KGGGKPDMAM AGGTNAAALP QALAAVQGWV GERI
|
|---|
| |