| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1978 |
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| Symbol | |
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| ID | 4674070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2077713 |
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| End bp | 2079203 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639839056 |
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| Product | succinate semialdehyde dehydrogenase |
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| Protein accession | YP_986230 |
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| Protein GI | 121594334 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0648887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGATGA AGACATCACC CCTTTCCCTG CTCAAGGATC CGAGCCTGCT CAAGACCGAC
GCCCTGCTGG GAGGCCAGTG GTTCGCAGGC GGCGCACGCT TTGCCGTGCA CGACCCGGCC
ACCGGCCTGA AGTTGGCCGA TGTGGCCAAC CTGGGGGCCA AGGAAGCCGA GCTGGCCATC
GCCGCCGCCA ACGAAGCATG GCCCGCATGG AAGGCCAAGA CCGCCAAGGA GCGCAGCACC
ATCCTGCGCC AGTGGTTTGA CCTGCTCATG CAGCACCAGG ACGACCTGGG CCGGCTCATG
ACGGCGGAGC AAGGCAAGCC ACTGCCCGAG GCCAAGGGCG AGGTGGCCTA TGGCGCCAGC
TTCGTCGAGT GGTTTGCCGA GGAGGCCAAG CGCGTGAACG GCGAGACCCT GCCGCAGTTC
GACAACAACC GCCGCCTGTT GGTGCTCAAG CAGCCCATCG GCGTGTGCGC GGCGATCACG
CCGTGGAACT TCCCCTTGGC AATGATCACG CGCAAGGTGG CGCCGGCGCT CGCGGCGGGC
TGTCCGGTGG TCATCAAGCC GGCCGAGCTC ACGCCCCTCA CCGCCCTTGC CGCGGCCGAG
CTGGCGTTGC GCGCGGGCAT TCCCGCAGGC GTGCTGAGCG TGCTGACGGC CGATGCGGAG
AACTCCATCG CCATCGGCAA GGTGCTGTGC GCAAGCGACG TCGTGCGCCA CCTGTCGTTC
ACCGGCTCGA CGGAGGTCGG GCGCATCCTC ATGGCCCAGT GCGCGCCCAC GGTGAAGAAG
CTGAGCCTGG AGCTGGGCGG CAATGCGCCG TTCATCGTGT TCGACGATGC CGACCTCGAT
TCCGCCGTAG AAGGCGCCTT TGCCAGCAAA TACCGCAATG CCGGGCAGAC CTGCGTGTGC
ACCAACCGCT TCTACGTGCA GGCGGGGGTG TACGACGCCT TCGTCGCCAA GTTTGCCGCT
CGCGTAAAAA CCGCAAAGGT CGGCAATGGC TTCGAGGACG GCGTGAACCA GGGCCCGCTG
ATCGAACCCG CCGCGGTGGA CAAGGTACAG CGCCACCTGG ACGACGCCAT CGCCAAGGGC
GCCAGCGTCG TGACGGGCGG AAAGCACCTG GCGGAACTGG GCGCGGGCCA GTTCTTTGAG
CCCACGGTGC TGGCCAACGC CACCGCTGGA ATGCTGTGCG CGCGCGAGGA AACCTTCGGC
CCGCTGGCGC CGGTCTTCAG GTTCGAGACC GAGCAGGAAG CCATCGCTGC CGCCAACGCC
ACCGAGTTCG GCCTGGCCAG CTACTTCTAC AGCCGCGACG TGGGCCGCAT CTTCCGAGTG
GGCGAGGCGC TGGAATATGG CATGGTGGGT GTGAACGTCG GCATTCTCGC GACCGAGCAT
GTGCCCTTCG GTGGCGTCAA GCAGTCGGGC CTGGGGCGCG AGGGCTCCCA CTACGGCATG
GACGACTATG TGGAGATCAA ATACCTCTGC GTGGGCGATA TCCAGAAGTA G
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| Protein sequence | MEMKTSPLSL LKDPSLLKTD ALLGGQWFAG GARFAVHDPA TGLKLADVAN LGAKEAELAI
AAANEAWPAW KAKTAKERST ILRQWFDLLM QHQDDLGRLM TAEQGKPLPE AKGEVAYGAS
FVEWFAEEAK RVNGETLPQF DNNRRLLVLK QPIGVCAAIT PWNFPLAMIT RKVAPALAAG
CPVVIKPAEL TPLTALAAAE LALRAGIPAG VLSVLTADAE NSIAIGKVLC ASDVVRHLSF
TGSTEVGRIL MAQCAPTVKK LSLELGGNAP FIVFDDADLD SAVEGAFASK YRNAGQTCVC
TNRFYVQAGV YDAFVAKFAA RVKTAKVGNG FEDGVNQGPL IEPAAVDKVQ RHLDDAIAKG
ASVVTGGKHL AELGAGQFFE PTVLANATAG MLCAREETFG PLAPVFRFET EQEAIAAANA
TEFGLASYFY SRDVGRIFRV GEALEYGMVG VNVGILATEH VPFGGVKQSG LGREGSHYGM
DDYVEIKYLC VGDIQK
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