| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1967 |
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| Symbol | |
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| ID | 4673751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 2062962 |
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| End bp | 2066156 |
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| Gene Length | 3195 bp |
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| Protein Length | 1064 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639839048 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_986223 |
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| Protein GI | 121594327 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.785197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.846182 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCTGC CCGCCTACGC AGAGCTGCAC GCACTGAGCA ACTTCAGCTT TCAGCGCGGC
GCCTCGCACC CGCAGGAACT GGTGCAGCGC GCGCACAAAC TGGGCTACAG CGCCCTGGCG
CTGACCGACG AATGCTCCGT CGCCGGCGTG GTGCGCGCCC ATGGCGCGGC GCAGGCGCTG
GGACTTCCGC TCATCGTGGG CAGCGAGTTC TGCTGGGGCG ACGTGCGCAT CGTGGCACTG
GCGCGCGACG TGCAGGGCTG GGGCGACCTG TGCGAATTCA TTACCGCCGC GCGCCAGCGT
GCCGGCAAGG GCGGCTACCG CGTGGATGCT CAGTCGCCCT GGGCGCTGCT GCAGGGCTGC
GAGGTGCTGC TGGCGCTCCG TCGTGAGGCG TTTGTCGATG CTTCTGATTT GGTAGCTGTC
AGCGCTTGTC TGGAAAGCGT TAGAGGCCTA TTTGGCTCTA ACTGCTGGCT GGCGGTAGAG
CTGCACACCG CACCGGACGA CGGCCTGTGG CTGCGCACGC TCACGCAGGC CGGCGCGCGG
CTGGGCCTGC CGTTGGTGGC CGCGGGTGAC GTGCACATGC ACTCGCGCGC GGCCAAGCCG
CTGCAGGACG TACTGACCGC CGTGCGCCTG GGCCGCAGCG TGGCCGCGTG CGGCTTCGCG
CTGCAGCCGC ATGCCGAAAA GCGCCTGCGC CCGCGCAGCC GGCTGGCGGG CCTGTACCCG
CCCGCGCTGC TGGCGGCCAC GCTGCAGGTG GCGGCGCGCT GCACCTTCAG CCTGAACGAG
ATCAAGTACC GCTACCCGCT GGAGACCGTG CAGCCCGGCA TGACGGCAAG CCAGACGCTG
GCCTGCCTCA CCTGGGAGGG CGCGCGTGTC CGTTATCCCG ATGGCGTGCC AGAAGCGGTG
GCGGCGCAGG TCGAGAAGGA GCTGGCGCTG ATCGCCGAGT GCGGGTACGA GATGTACTTC
CTCACGGTGC ACGACATCGT GCGCTATGCG CGCAGCCAGG GCATTCTGTG CCAGGGGCGG
GGCTCGGCGG CCAACTCGGC GGTGTGTTAT TGCCTGGGCA TCACGGCGGT GGACCCGCAG
AAGACGCGCC TGCTGTTCGA GCGCTTCATC AGCCGCGAAC GCAGCGAGCC GCCCGACATC
GACGTGGACT TCGAGCACGA CCGGCGCGAG ACCGTCATCC AGTACATCTA CGACAAGTAC
GGGCGCGAGC GCTCCGCGAT CACCGCGGTG GTCATCAGCT ACCGCACGCG CAGCGCCCTG
CGCGACGTGG GCAAGGCCCT GGGTGTGGCG CCGGCGCTGG TGGATGCGTT CGCCAAGGAG
CACCACTGGT TCGACGACGT GCTGGCCACG GAGCACCTGC TGGCGCTGGC CGAGCGCCTG
GGCGAGCCGC TGGGCGCGCA CACGGCCGCG CTGTGGCTGC AACTGGCGCG CCAGCTGCGT
GGCTTTCCGC GCCACCTGAG CCAGCACGTG GGCGGCTTCG TGCTCACCGA GGGCAAGCTC
ACGCGCCTGG TGCCCGTGGA GCCGGCCGCC ATGGACGGGC GCTCCATCAT CCAGTGGGAC
AAGGACGATC TGGACGCCAT GGGCCTCTTG AAGGTGGACG TGCTGGCGCT GGGCATGCTC
AGCGCGCTGC GCCGCTGCCT GGAAATGCGT GCCGCGCTGC GGGGCGAGTC ATGGGACCTG
GCCGACATCC CGCCCGAAGA CCCGGCTACC TACGACATGG TCTGCCGCGC TGACACCGTG
GGCGTGTTCC AGATCGAGAG CCGCGCGCAG ATGAGCATGC TGCCGCGCCT GCAGCCGCGC
GAGTTCTACG ACCTGGTGGT GCAGGTGGCG ATCGTGCGGC CCGGGCCCAT CCAGGGCGGC
ATGGTGCACC CCTACCTGCA GGCGCGCGAG CGCCGGCGCC AGTGGCAGCG CAGGCAGCGC
ACGAAGCGCG AGGAGCCGTT CCCCATTGAA TACCCGAGGC TCGGCAACGC CCTGCGGCGC
ACGCTGGGCG TGCCCATCTT CCAGGAACAG GTGATGCAGA TCGCCATCGA CGGCGCGGGC
TTCAGCGCGG GCCAGGCCGA CGAGCTGCGC CGCTCCATGG CCGCCTGGCG GCGCAAGGGC
GAGGTGCACC GCTTCGAGAA GCCCTTCAAG GACGGTCTGT TGGCGAACGG CTACCCGCCG
GAATTTGCCG ACCGGCTGTT CCAGCAGATC CTGGGCTTTG GCGAATACGG CTTTCCCGAA
AGCCATGCCT ACAGCTTTGC GCTGCTGGCC TACGCCAGCA GCTGGCTCAA GCGGCACGAG
CCTGCGTGCT TCTTGGCCGC GCTGCTCAAT GCGCAGCCGC TGGGCTTTTA CACACCGGCG
CAACTGGTGC AGGACGCGCG CCGCCATGGC GTGCGCGTGC TGCCCATCGA CGTGGCGACG
AGCGACGTGG ACTGCACACT GGAGGAGCCC CTGGCACCCG TTGCCGGCGT GTCCTTGGCG
CAGCCGGCCG TGCGCCTGGG CCTGCGACTG GTGGCGGGGC TGGGCGCGGC GGCGGCCGAG
CGGCTGGTGC AGGCGCGCGG CAGCGGCCCC TTCGCCAGCA CCGAAGACCT GGCCCTGCGC
GCGCGGCTGG ACCGGCAGGA TCTGCAGGCC CTGGCCGCGG CTGATGCGCT GCGCGCGCTG
GCGGGCCACC GGCGCCAGCA GATGTGGGAC GCCGCGGCCC AGCTGCGTGC TCCGCCGCTG
CTACAGGACG CGCCCGTGCA TGAGGCCGCC CTGCAGTTGC CCGCCGCACC AGAGGGCGAA
GACATCTTGT GGGACTACGC CGCCACGGGC CTGACGCTGC GGCGCCACCC CCTGGCGCTG
CTGCGCGAGA AGCTGCAGCG CTGGCGGCTG GCCACGGCGC AGCAGTTGCA ATCGGCGCCC
CATGGGCGGC GCGTGCGTGC CTGCGGCATC GTCACCGTGC GCCAGCGGCC GGGCTCGGCC
AACGGCACGA TGTTCGTCAC GCTGGAGGAC GAGACCGGCT CGGTCAATGT GATCGTGTGG
CCCGCGCGGC TGGAGCGCTG GCGCAGCGCG CTGCTGCGCT CGCGCCTGCT GGCGGTGGAG
GGCGTGTGGC AGTGCGCCCG CGCACCGGGC GCGGACACGG CCGTGCGCCA CCTGGTGGGC
GAGCGGTTCA AGGACCTCAC GCCGCTGCTG GGCCGCCTGG CGCAGGCGCT GGACGGCAGC
CGCGACTTCC ATTGA
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| Protein sequence | MMLPAYAELH ALSNFSFQRG ASHPQELVQR AHKLGYSALA LTDECSVAGV VRAHGAAQAL
GLPLIVGSEF CWGDVRIVAL ARDVQGWGDL CEFITAARQR AGKGGYRVDA QSPWALLQGC
EVLLALRREA FVDASDLVAV SACLESVRGL FGSNCWLAVE LHTAPDDGLW LRTLTQAGAR
LGLPLVAAGD VHMHSRAAKP LQDVLTAVRL GRSVAACGFA LQPHAEKRLR PRSRLAGLYP
PALLAATLQV AARCTFSLNE IKYRYPLETV QPGMTASQTL ACLTWEGARV RYPDGVPEAV
AAQVEKELAL IAECGYEMYF LTVHDIVRYA RSQGILCQGR GSAANSAVCY CLGITAVDPQ
KTRLLFERFI SRERSEPPDI DVDFEHDRRE TVIQYIYDKY GRERSAITAV VISYRTRSAL
RDVGKALGVA PALVDAFAKE HHWFDDVLAT EHLLALAERL GEPLGAHTAA LWLQLARQLR
GFPRHLSQHV GGFVLTEGKL TRLVPVEPAA MDGRSIIQWD KDDLDAMGLL KVDVLALGML
SALRRCLEMR AALRGESWDL ADIPPEDPAT YDMVCRADTV GVFQIESRAQ MSMLPRLQPR
EFYDLVVQVA IVRPGPIQGG MVHPYLQARE RRRQWQRRQR TKREEPFPIE YPRLGNALRR
TLGVPIFQEQ VMQIAIDGAG FSAGQADELR RSMAAWRRKG EVHRFEKPFK DGLLANGYPP
EFADRLFQQI LGFGEYGFPE SHAYSFALLA YASSWLKRHE PACFLAALLN AQPLGFYTPA
QLVQDARRHG VRVLPIDVAT SDVDCTLEEP LAPVAGVSLA QPAVRLGLRL VAGLGAAAAE
RLVQARGSGP FASTEDLALR ARLDRQDLQA LAAADALRAL AGHRRQQMWD AAAQLRAPPL
LQDAPVHEAA LQLPAAPEGE DILWDYAATG LTLRRHPLAL LREKLQRWRL ATAQQLQSAP
HGRRVRACGI VTVRQRPGSA NGTMFVTLED ETGSVNVIVW PARLERWRSA LLRSRLLAVE
GVWQCARAPG ADTAVRHLVG ERFKDLTPLL GRLAQALDGS RDFH
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