Gene Ajs_1962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1962 
Symbol 
ID4673605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2057508 
End bp2058146 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content64% 
IMG OID639839043 
Productbutyryl-CoA:acetate CoA transferase 
Protein accessionYP_986218 
Protein GI121594322 
COG category[I] Lipid transport and metabolism 
COG ID[COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 
TIGRFAM ID[TIGR02428] 3-oxoacid CoA-transferase, B subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTGGA CCCAAGACCA GATGGCGGCC CGCGCCGCGC AAGAACTCGA AGACGGCTTC 
TACGTCAACT TAGGGATAGG CATTCCCACG CTGGTGGCCA ATTTCACCGG CGACAAAGAG
GTGTGGCTGC AGTCGGAGAA CGGCATGCTG GGCATCGGTG CCTTTCCCAC CGAGGACAAG
GTGGATGCCG ACCTCATCAA CGCCGGCAAG CAGACCGTCA CCACCATCCC CGGTTCGTCC
ATCTTCAGTT CGGACCAGTC GTTCGCGATG ATCCGCGGCG GCAAGATCAA CCTGTCCATC
CTGGGCGCCA TGCAGGTCAG CGAGAAGGGC GACCTGGCCA ACTGGATGAT CCCCGGCAAG
ATGGTCAAGG GCATGGGCGG CGCCATGGAC CTGGTGGCCG GTGTCAAGCG CGTGATCGTG
CTCATGGAGC ATGTGGCGCG CAAGAAGGAC GGCACCACCG ACCTGAAGAT CCTGCCGGCC
TGCACGCTGC CGCTGACGGG CGTGGGCGTG GTGGACCGCA TCATCACCGA CCTGGGCGTG
ATGGACGTCA CCCCCGAAGG CCTGAAGCTG GTGGAACTGG CGCCGGGCGT GAGCTTCGAG
GACATCCAGT CCAAAACCGG CGTGCCGCTG CTGCGCTGA
 
Protein sequence
MPWTQDQMAA RAAQELEDGF YVNLGIGIPT LVANFTGDKE VWLQSENGML GIGAFPTEDK 
VDADLINAGK QTVTTIPGSS IFSSDQSFAM IRGGKINLSI LGAMQVSEKG DLANWMIPGK
MVKGMGGAMD LVAGVKRVIV LMEHVARKKD GTTDLKILPA CTLPLTGVGV VDRIITDLGV
MDVTPEGLKL VELAPGVSFE DIQSKTGVPL LR