| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1961 |
|---|
| Symbol | |
|---|
| ID | 4673572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 2056797 |
|---|
| End bp | 2057504 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639839042 |
|---|
| Product | 3-oxoacid CoA-transferase, A subunit |
|---|
| Protein accession | YP_986217 |
|---|
| Protein GI | 121594321 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACAAGC TTTACCCCTC GGCGGCCGAA GCGCTCAAGG GCGTCGTGGC CGATGGCCAG
CTGATGGCCG TTGGCGGTTT CGGCCTGTGC GGCATTCCAG AGGCCTTGAT CGATGCGCTG
CAGGCCAGCG GCGTGAAGGA CCTCACGGTG ATTTCCAACA ACGCGGGCGT TGACGGCTTC
GGCTTGGGCA AGCTGCTGGA GACGCGCCAG ATCAAGAAGA TGATCAGCTC CTACGTGGGC
GAGAACAAGG AATTCGAGCG CCAGTACCTC GCGGGCGAGC TGGAGCTGGA GTTCACCCCG
CAGGGCACGC TGGCCGAGAA GCTGCGTGCC GGCGGCGCGG GCATCCCGGC CTTCTTCACC
AAAACCGGCG TGGGCACCAT CGTGGCCGAG GGCAAGGAGC TGCGCGAGTT CGACGGCGAG
ACCTATGTGA TGGAACGCTC GCTGGTGCCG CAGGTTTCGC TGGTCAAGGC GCAGCGGGCC
GACAAGTCGG GCAATCTGCA GTTCCGCCTG ACGGCACGCA ACTTCAACCC GGCCGCCGCC
ATGGCGGGCA AGCTGTGCAT CGTCGAGGTG GAGGAGGTGG TGGAGACCGG CGCCCTGGAC
CCCGACCAGA TCCACCTGCC CGGCATCTAC GTGCACCGCA TCGTGCACAA CCCGAACCCC
GAGAAGCGCA TCGAGAAGCG CACCATCACC GAGAAAGCAG GAGCCTGA
|
|---|
| Protein sequence | MNKLYPSAAE ALKGVVADGQ LMAVGGFGLC GIPEALIDAL QASGVKDLTV ISNNAGVDGF
GLGKLLETRQ IKKMISSYVG ENKEFERQYL AGELELEFTP QGTLAEKLRA GGAGIPAFFT
KTGVGTIVAE GKELREFDGE TYVMERSLVP QVSLVKAQRA DKSGNLQFRL TARNFNPAAA
MAGKLCIVEV EEVVETGALD PDQIHLPGIY VHRIVHNPNP EKRIEKRTIT EKAGA
|
|---|
| |