Gene Ajs_1954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1954 
Symbol 
ID4673342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2049173 
End bp2049874 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content68% 
IMG OID639839035 
ProductPAP2 (acid phosphatase) superfamily protein-like protein 
Protein accessionYP_986210 
Protein GI121594314 
COG category[R] General function prediction only 
COG ID[COG3907] PAP2 (acid phosphatase) superfamily protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.556435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTCT GGAATTTGCG CCGCCTGTAT GCGGTGACGT TGTTGCTTTT CCTGTTGCTC 
GTCTTGTGGG ACGCTTCGGG CCTGGACTTG CCATTGGCCC GCCTGTTTGG GGGGGCGCAG
GGCTTTGCCT GGCGTGACCA CCGCACCTTT GCCCTGCTGA CGCACGAGGG TCCGCGCTAT
GCGAGCGGCG CGCTGCTGGC CGCACTGGCG GTGGGGGTGT GGCGGCCCTG GGGATTCCTG
CGCGTCATGG CGCCGGCGCA GCGCGCGCAA CTGGTGCTGT CCGTCATCGG GGCGATGCTG
GCGGTTTCGG TGTTCAAGCG CCTGAACACC ACCAGCTGTC CCTGGGATCT GGCCGAGTTC
GGCGGGGTGG CGCAGTACAT CTCGCACTGG GTGTGGGGCG TGCGCGACCT AGGGCCGGGA
CACTGCTTCC CTGCAGGGCA TGCCTCGGCC GCGTTTGGTT TTGTAGCGGG CTGGTTCGTA
CTGCGCCGCG CGGCGCCGAA CGTGGCGCGC CTCTGGCTGC CAGGCGCTCT GATGGCCGGG
CTGGCACTGG GCTGGGCGCA GCAGATGCGC GGTGCACATT TCATGAGCCA CACTCTGTGG
TCCGCCTGGT CCTGCTGGGC CGTGGGCCTT GCGTGGGAAA GTCTGGCGCA GCTGCACGTG
CGCCTGGGAG TAGCGGCAGA TACAAAGCTG AACGAAGCCT GA
 
Protein sequence
MPFWNLRRLY AVTLLLFLLL VLWDASGLDL PLARLFGGAQ GFAWRDHRTF ALLTHEGPRY 
ASGALLAALA VGVWRPWGFL RVMAPAQRAQ LVLSVIGAML AVSVFKRLNT TSCPWDLAEF
GGVAQYISHW VWGVRDLGPG HCFPAGHASA AFGFVAGWFV LRRAAPNVAR LWLPGALMAG
LALGWAQQMR GAHFMSHTLW SAWSCWAVGL AWESLAQLHV RLGVAADTKL NEA