Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1949 |
Symbol | |
ID | 4673847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 2041946 |
End bp | 2042914 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639839030 |
Product | hypothetical protein |
Protein accession | YP_986205 |
Protein GI | 121594309 |
COG category | [R] General function prediction only |
COG ID | [COG2984] ABC-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.521982 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.530099 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAGTT TGTCTTGGGC GCCCTTGGGC GCTATCGCCC TGGCCGCAGC CGCCCTCGCG CCCGTGGCGC ATGCGCAGCA AAAGTCCGTT GCCGTGACCG CCATCGTGGA GCACCCCGCC CTGGACTCGA TCCGCGACGG CGTGAAGGCC CAGTTGCAGG CTGCCGGCTT TGAAGAGGGC AAGAACCTCA AGTGGCAATA CCAGAGCGCC CAGGGCAACA CGGGCACCGC CGCGCAGATC GCGCGCAAGT TCGTGGGTGA CAAGCCTGAC GCCATCGTCG CCATCGCCAC GCCCTCTGCC CAGGCCGTAG TGGCTGCCAC CAAGACCGTG CCTGTGGTGT TCTCTGCCGT GACGGATCCC GTGGCCGCCA AGCTGGTGAA GAACTGGGAA CCCTCCAAGA CCAACGTGAC CGGCGTATCC GACATGCTGG CGCTGGACAA GCAGATGGAC CTAGTCAAGC AGGTCGTGCC CGGCGCCAAG CGCGTGGGCA TGGTCTACAA CCCGGGCGAG GCCAACTCCG TCGTCGTGGT CAAGGAACTC AAGCAACTGT TGCCCAAGAT GGGCATGACG CTGGTGGAGG CTTCTGCCCC GCGCTCGGTG GACGTGAGCA GCGCCGCGCG CAGCCTGGTG GGCAAGGTGG ACGTGATCTA CACCAACACG GACAACAACG TCGTCTCGGC CTACGAGTCG CTGGTGAAGG TGGGCCAGGA GGCCAAGGTG CCGCTGGTGG CATCCGACAC CGACAGCGTC AAGCGCGGCG CCATCGCCGC CCTGGGCATC AACTACCGCG ACCTGGGCGA GCAAACTGGC CGCATGGTGG CGCGCATCCT CAAGGGCGAA AAGCCCGGCG ACATCAAGCC CGAAGTCAGC ACGAAGATGG AACTGTTCGT GAACCCAGGC GCCGCAGAGA AGCAGGGCGT GAAGCTCTCC GACGCGCTGG TGAAATCCGC CACGCAAGTG GTCCAATAA
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Protein sequence | MKSLSWAPLG AIALAAAALA PVAHAQQKSV AVTAIVEHPA LDSIRDGVKA QLQAAGFEEG KNLKWQYQSA QGNTGTAAQI ARKFVGDKPD AIVAIATPSA QAVVAATKTV PVVFSAVTDP VAAKLVKNWE PSKTNVTGVS DMLALDKQMD LVKQVVPGAK RVGMVYNPGE ANSVVVVKEL KQLLPKMGMT LVEASAPRSV DVSSAARSLV GKVDVIYTNT DNNVVSAYES LVKVGQEAKV PLVASDTDSV KRGAIAALGI NYRDLGEQTG RMVARILKGE KPGDIKPEVS TKMELFVNPG AAEKQGVKLS DALVKSATQV VQ
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