Gene Ajs_1949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1949 
Symbol 
ID4673847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2041946 
End bp2042914 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content65% 
IMG OID639839030 
Producthypothetical protein 
Protein accessionYP_986205 
Protein GI121594309 
COG category[R] General function prediction only 
COG ID[COG2984] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.521982 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.530099 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGTT TGTCTTGGGC GCCCTTGGGC GCTATCGCCC TGGCCGCAGC CGCCCTCGCG 
CCCGTGGCGC ATGCGCAGCA AAAGTCCGTT GCCGTGACCG CCATCGTGGA GCACCCCGCC
CTGGACTCGA TCCGCGACGG CGTGAAGGCC CAGTTGCAGG CTGCCGGCTT TGAAGAGGGC
AAGAACCTCA AGTGGCAATA CCAGAGCGCC CAGGGCAACA CGGGCACCGC CGCGCAGATC
GCGCGCAAGT TCGTGGGTGA CAAGCCTGAC GCCATCGTCG CCATCGCCAC GCCCTCTGCC
CAGGCCGTAG TGGCTGCCAC CAAGACCGTG CCTGTGGTGT TCTCTGCCGT GACGGATCCC
GTGGCCGCCA AGCTGGTGAA GAACTGGGAA CCCTCCAAGA CCAACGTGAC CGGCGTATCC
GACATGCTGG CGCTGGACAA GCAGATGGAC CTAGTCAAGC AGGTCGTGCC CGGCGCCAAG
CGCGTGGGCA TGGTCTACAA CCCGGGCGAG GCCAACTCCG TCGTCGTGGT CAAGGAACTC
AAGCAACTGT TGCCCAAGAT GGGCATGACG CTGGTGGAGG CTTCTGCCCC GCGCTCGGTG
GACGTGAGCA GCGCCGCGCG CAGCCTGGTG GGCAAGGTGG ACGTGATCTA CACCAACACG
GACAACAACG TCGTCTCGGC CTACGAGTCG CTGGTGAAGG TGGGCCAGGA GGCCAAGGTG
CCGCTGGTGG CATCCGACAC CGACAGCGTC AAGCGCGGCG CCATCGCCGC CCTGGGCATC
AACTACCGCG ACCTGGGCGA GCAAACTGGC CGCATGGTGG CGCGCATCCT CAAGGGCGAA
AAGCCCGGCG ACATCAAGCC CGAAGTCAGC ACGAAGATGG AACTGTTCGT GAACCCAGGC
GCCGCAGAGA AGCAGGGCGT GAAGCTCTCC GACGCGCTGG TGAAATCCGC CACGCAAGTG
GTCCAATAA
 
Protein sequence
MKSLSWAPLG AIALAAAALA PVAHAQQKSV AVTAIVEHPA LDSIRDGVKA QLQAAGFEEG 
KNLKWQYQSA QGNTGTAAQI ARKFVGDKPD AIVAIATPSA QAVVAATKTV PVVFSAVTDP
VAAKLVKNWE PSKTNVTGVS DMLALDKQMD LVKQVVPGAK RVGMVYNPGE ANSVVVVKEL
KQLLPKMGMT LVEASAPRSV DVSSAARSLV GKVDVIYTNT DNNVVSAYES LVKVGQEAKV
PLVASDTDSV KRGAIAALGI NYRDLGEQTG RMVARILKGE KPGDIKPEVS TKMELFVNPG
AAEKQGVKLS DALVKSATQV VQ