Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1946 |
Symbol | |
ID | 4673974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 2039038 |
End bp | 2040051 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639839027 |
Product | AraC family transcriptional regulator |
Protein accession | YP_986202 |
Protein GI | 121594306 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.73017 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.353562 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGCCG CGACAAAAAC CTTTGCCTCG ATCGTGAATC GCCGGCAGGC CGAGCCCCAG GCGGGGGAAA TGACGGCCCT GCTGCTGGAC CGTCTGGCGC ACGGTGGGGC TTTGAGCGGG CCCGAGCAGG CCGTCGGCGG TTCCGTGTTC AACGGCACGC TGTCCCTGGC CGAACTGCGC GACGGGTTCT TCCTGCACCG CACGGACATC GCGTACCTGC GTGGCTTGAC CAGCCGCTTC CCGCTGACCA AGAGCGGGAT CAAGATCGTG CTCAAGCTGC AGGGCGGCGG CAGGCTGCGC ATCGGCCCCC TGGTCCTGCC GGTGGAGGTG CCCCCAGGCG GGGGTGCCCG GGCGGCGGTG GTGGCACTGC GCGGGCCGGC GCCGTACGAG CACCGCTGCC GCGCGCCGTC GCGCGAGCGC ATGCTGGTTC TCACGCTGGC GCCGCACTGG CTGGACAAGG CGGGGCTGGG CCACCTGAAT GCGCTGCCCC ACCTGACCAT GACGGCGTGG GCGCCTTCGC CCAGGGCGGT GTGCGTTGCC GAGCAGTTGT TGGCAGAGGG CCAGGTGCAG TACGGGCCGC TCAGGGGGCT GCAGCAGGAG TGCCTTACGC TCGAACTGGT CATCGAGGCG CTGGCGCAGT GGGTCGCGCC CGCCAATTCC GCCGCCGCAT GCGAGGCAGC CGGATTGCGG CCAACCGCGT ACCAGAGGGC ATGCCATCTG CGCGACTGGC TCGACAGCGG CGCCGCTGAC TCCCTCACCA TGGGCGCAAT CGCGCGGCAC ATGGGCTGCA ACGCCAGCAC CCTGCAAACG CAGTTCCGCC AGGCATTCGG CAAGCCCATC TTCGAACACT TGCGCGAAGG CCGCTTGCGC AGGGCGGCCG ATGCCATCAC GGCACAGGGC ATCACCGTGG CGCAGGCGGC GGACTTGGCG GGCTATCGCA GCCCTGCGAA TTTCTCCACC GCCTTTCGCA GGCTCTACGG CTTTTCGCCC AAAAATCTCC GCGCGAAGCG CTGA
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Protein sequence | MFAATKTFAS IVNRRQAEPQ AGEMTALLLD RLAHGGALSG PEQAVGGSVF NGTLSLAELR DGFFLHRTDI AYLRGLTSRF PLTKSGIKIV LKLQGGGRLR IGPLVLPVEV PPGGGARAAV VALRGPAPYE HRCRAPSRER MLVLTLAPHW LDKAGLGHLN ALPHLTMTAW APSPRAVCVA EQLLAEGQVQ YGPLRGLQQE CLTLELVIEA LAQWVAPANS AAACEAAGLR PTAYQRACHL RDWLDSGAAD SLTMGAIARH MGCNASTLQT QFRQAFGKPI FEHLREGRLR RAADAITAQG ITVAQAADLA GYRSPANFST AFRRLYGFSP KNLRAKR
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