| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1939 |
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| Symbol | |
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| ID | 4673064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2031630 |
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| End bp | 2032907 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639839020 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_986195 |
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| Protein GI | 121594299 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0392462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGG TCATGATCTC CACCATGGTG CTGTGCTTCG CGCTCACCAT ATCCGTGGCC
GTCTCCATCG GGCTGGCCTC CATCCTGGGC ATCCAGGTGG CGAACGCCAA CATGCTGATC
TCCGTGAAGG AGATGTTCGC CTCCATCAAC AAGTTTCCGC TCGCAGCCAT TCCGTTCTTC
ATCCTGGCGG GCAACCTCAT GGAGACCGGC GGTATTTCGC GCCGGCTCGT GGAGTTTGCC
AAGAGCATCG TGGGCGGCGT GCAGGGCGGC CTGCCCATGA CCTGCGTGCT CACCTGCATG
ATCTTCGCGG CCGTCTCAGG GTCATCGGTG GCGACCACGT TCGCCATCGG CGCCATCCTG
ATTCCTGCGC TCATCAAGCA TGGCTACCCC ACCAGCTACG CGGCCGCGCT GCAGGCCACC
AGTGCCGAGC TGGGTGTGAT CATCCCGCCG TCGATCCCCA TGATCCTGTA CGGCGTGGCG
GCCGAGGTAT CGATCGGCGA GCTGTTCATC GCCGGCTTCG GCCCCGGCAT CCTGATCAGC
GGTGCGCTGA TGTTGTTCGT CTGGGTGTAT TGCAAGTACA AGGGCTGGGG CAAGCATGAC
GGCGATGGGC GCATGCCCTT CGGCCGCGCA CTGCTGCAGG CGGGCTGGGC ACTGCTGATG
CCAGTCATCA TCCTGGGCGG CATCTACGGC GGCGTGTTCA CGCCCACCGA GGCCTCTGCC
GTGGCCGTGT TCTACGCGCT GGTGGTGGGC ATGCTGATCT ACCGCGAGAT CCGCGTCGCG
GACCTGTTCG CCATCCTACG CAAGTCGGCC ATCTCGTCGG CGGTGATCAT GTTCATCATT
GCCAATGCGG GCCTGTTTGC CTTCCTCATC ACGCGCGCTG GCGTGCCGGA CGCCATCGGC
CGCTGGCTGC AGGAGGTGCT GCAGTCGCCC GCGCTGTTCC TGCTGGGCGT GAATGCCGCG
CTGTTCGTGA TCGGCATGTT CATCGAGACC AGCGCCGCCA TCATCGTGCT GGCGCCGATC
CTGGCGCCGG TGGCCCAGCA CTTCGGCGTG GACCCGGTGC ACTTCGGGCT GATCATGGTG
GTGAACCTGG CGCTCGGCAT GATCACGCCA CCCTTCGGCG TGAACCTGTT CGCGGCGTGC
ACGGTGGCGC GCATCTCTCT GGATCGCATC GTCGCCCACC TGCTGCCGTT CGTGGGCGTG
GTCCTGCTGT GCCTCCTGGT CATCACCTAC GTGCCATCGC TTTCATTGGC CCTGCGTGAT
CTCGTGTACG CAAAATAG
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| Protein sequence | MTTVMISTMV LCFALTISVA VSIGLASILG IQVANANMLI SVKEMFASIN KFPLAAIPFF
ILAGNLMETG GISRRLVEFA KSIVGGVQGG LPMTCVLTCM IFAAVSGSSV ATTFAIGAIL
IPALIKHGYP TSYAAALQAT SAELGVIIPP SIPMILYGVA AEVSIGELFI AGFGPGILIS
GALMLFVWVY CKYKGWGKHD GDGRMPFGRA LLQAGWALLM PVIILGGIYG GVFTPTEASA
VAVFYALVVG MLIYREIRVA DLFAILRKSA ISSAVIMFII ANAGLFAFLI TRAGVPDAIG
RWLQEVLQSP ALFLLGVNAA LFVIGMFIET SAAIIVLAPI LAPVAQHFGV DPVHFGLIMV
VNLALGMITP PFGVNLFAAC TVARISLDRI VAHLLPFVGV VLLCLLVITY VPSLSLALRD
LVYAK
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