| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1936 |
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| Symbol | |
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| ID | 4672732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2026781 |
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| End bp | 2029675 |
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| Gene Length | 2895 bp |
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| Protein Length | 964 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639839017 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_986192 |
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| Protein GI | 121594296 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0995086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATGC CCTCCCCCCT GCCCCTGGCG GCGCTTGAAA ACGCCGCTGA ATTCCTGCCC
CGCCACATTG GCATCGACGC CGCCGACGAA GCACACATGC TGTCGGTGAT CGGCGAGGCT
TCGCGCCGCG CGCTCATTGA TTCCATCGTG CCGCGCTCCA TCGCGCGCCA GCGCCCCATG
GACCTGCCCG CGCCGGCCAC CGAGGCCGCA GCGCTGGCTG AACTCCAGGC CATTGCGTCG
AAGAACCGCA TTCTCAAGAG CTTCATCGGC CAGGGCTACT ACGGCACGCA CACGCCGGGC
GTCATCCTGC GCAACGTGCT GGAAAACCCT GCCTGGTACA CGGCCTACAC GCCCTACCAG
GCCGAGATCT CCCAGGGCCG CATGGAGGCG CTGCTCAACT TCCAGACCAT GGTGTGCGAC
CTCACGGCCA TGCCCATCGC CAACGCCTCC ATGCTAGACG AGGCCACCGC TGCCGCCGAG
GCCATGACGC TGGCTAAGCG CTCGGTCAAG TCCAAGAGCG ACGTCTTCAT CGTGGCAGGC
GATGCGCACC CGCAGACCAT CGAAGTCATC CAGACCCGCG CCGCCCCCAT CGGCATCACC
GTGGTGGTGG CCAATTCCCA GGAGGAATGG CAGGCGGCCC TGGCCGGCGA CTTCTTCGCC
GCCCTCATCC AGTACCCTGC CAGCAGCGGC TGGGTGCAGG ACTGGCAGGC CGACGTGGAC
GCCATCCACG CCAAACAGGC CGCCGCCATC TTCGTTACCG ACCTGCTGGC GCTCACGCTG
CTCAAGGCCC CCGGCGAGTG GGACGCCGAC ATCGTGGTGG GCTCCACCCA GCGCTTTGGC
ATGCCCATGG GCGCCGGCGG ACCGCACGCC GCCTTCATGG CCTGCCGCGA CGAATTCAAG
CGCAGCCTGC CCGGCCGCCT GGTGGGCGTG AGCGTGGACG TGCACGGCAA GCCCGCCTAC
CGCCTGGCGC TGCAAACGCG CGAGCAGCAC ATCCGCCGCG AGAAGGCCAC GAGCAACATC
TGCACGGCCC AGGTGCTGCC GGCCGTGATC GCCAGCATGT ACGCCGTGTA CCACGGCCCC
GAGGGCCTCA CGCGCATCGC CCGCCGCGTG GCGCGCTTCA CCGCCATCCT GAGCCGCGGC
CTGGCGCAGC TGGGGTTCAC CAGCCGCCAC CATGGCTCGG CCTTCGACAC ACTCAGCCTG
CACACCAAGG ATGCTACGGA TTCAATAGCT GCTCGCGCAG TCCAGATGGG CGCAAACCTG
CGAAAAGCCT GGAATGACTA CCTGTGCATC TCGCTGGACG AGACCACCAC CCGCGCCGAT
ATCGAGCTGC TGTGGAAGAT CTTTGCGCGG GACGGCCAGC AACTGCCCAC CATCGAGGCG
ATGGACGCCG CCGGCGCACC GGCGCTGTTC CCCGACACCC TGGCGCGCAC CAGCCGCTTC
TTGGCGCACC CGGTGTTCAA CACCCACCAT TCCGAAACCG GCATGCTGCG CTACATCCGC
CAGCTGTCCG ACAAAGACCT GGCGCTGGAC CGCACCATGA TCCCGCTGGG CTCGTGCACC
ATGAAGCTCA ACGCCACGAG CGAGATGATC CCCATCACCT GGCCCGAATT TGCCAACGTG
CACCCGTTCG CCCCGGCCGA CCAGCTCGAA GGCTACCGCC TGCTCGACGA GCAACTGCGC
GCCTGGCTGT GCCAGGCCAC GGGCTACGCG GGCGTCAGCC TGCAGCCCAA CGCAGGCAGC
CAGGGCGAAT ACGCCGGCCT GCTGGCCATC AAGGGCTACC ACGAGGCCCG TGGCGAGAGC
CACCGCAAGG TCTGCCTGAT CCCCAGCAGC GCGCACGGCA CCAACCCCGC CAGCGCCCAG
ATGGTGGGCA TGCAGGTGGT GGTGACCAAG TGCGACGAAA ACGGCAACGT GGACATGGCC
GACCTGCAGG CCCAATGCGA GAAGCACAGC GCCAACCTCG CCTGCGTGAT GATCACCTAC
CCCAGCACGC ATGGCGTGTT CGAGACCCAG GTGAAGGCCT TGTGCGAGCT GGTGCATCGC
CACGGCGGGC GCGTGTATGT GGACGGCGCC AACATGAACG CCCTGGTCGG CGTGGCCGCG
CCGGGCGAGT TCGGCGGCGA CGTGAGCCAC CTGAACCTGC ACAAGACCTT CTGCATCCCC
CACGGCGGCG GCGGCCCCGG CGTGGGCCCG GTGTGCGTGG TGGAGGACCT CGTGCCCTAC
CTGCCCGGCC ACGCCACGGG CGGCATTGCT TCCAAAACAG GAGCTGTCAG CGCAGCTCCC
TTGGGCAATG CAGCCGTTTT ACCCATCAGC TGGATGTACA TCCGCATGAT GGGCGCCGAC
GGTCTGCAGG CCGCGACCGA GACAGCGATC TTGAGCGCCA ACTACATCAG CGCGCGCCTG
AAGGACCACT ATCCCACGCT GTACGCTTCC GCCAACGGCC ATGTGGCGCA CGAGTGCATC
CTGGACCTGC GCCAGTTGAA GGACACCAGC GGCGTGATGG CCGAGGACGT GGCCAAACGC
CTGATCGACT ACGGCTTTCA CGCACCCACG CTGTCGTTCC CTGTGCCCAA CACGCTGATG
GTGGAGCCCA CCGAGAGCGA GACGCTGTTC GAGCTGGACC GCTTCATCGA CGCGATGATC
GCCATCCGGC GCGAGATCCG CCAGATCGAG GCCGGCACCT GGCCGCAGGA CGACAACCCC
CTCAAGAACG CGCCCCACAC GGCCGAGTGC CTGCTGGTAG CCGACTGGCA GCACCCCTAC
CCGCGCGATG CGGCAGCCTA TCCCGTTGCC GCCCTGCGCC AGAACAAGTA CTGGAGCCCC
GTGGGCCGTG TGGACAACGT CTACGGCGAC CGCAACCTGT TCTGCAGCTG TGTTCCGGTG
AGCGAACTGG GCTGA
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| Protein sequence | MQMPSPLPLA ALENAAEFLP RHIGIDAADE AHMLSVIGEA SRRALIDSIV PRSIARQRPM
DLPAPATEAA ALAELQAIAS KNRILKSFIG QGYYGTHTPG VILRNVLENP AWYTAYTPYQ
AEISQGRMEA LLNFQTMVCD LTAMPIANAS MLDEATAAAE AMTLAKRSVK SKSDVFIVAG
DAHPQTIEVI QTRAAPIGIT VVVANSQEEW QAALAGDFFA ALIQYPASSG WVQDWQADVD
AIHAKQAAAI FVTDLLALTL LKAPGEWDAD IVVGSTQRFG MPMGAGGPHA AFMACRDEFK
RSLPGRLVGV SVDVHGKPAY RLALQTREQH IRREKATSNI CTAQVLPAVI ASMYAVYHGP
EGLTRIARRV ARFTAILSRG LAQLGFTSRH HGSAFDTLSL HTKDATDSIA ARAVQMGANL
RKAWNDYLCI SLDETTTRAD IELLWKIFAR DGQQLPTIEA MDAAGAPALF PDTLARTSRF
LAHPVFNTHH SETGMLRYIR QLSDKDLALD RTMIPLGSCT MKLNATSEMI PITWPEFANV
HPFAPADQLE GYRLLDEQLR AWLCQATGYA GVSLQPNAGS QGEYAGLLAI KGYHEARGES
HRKVCLIPSS AHGTNPASAQ MVGMQVVVTK CDENGNVDMA DLQAQCEKHS ANLACVMITY
PSTHGVFETQ VKALCELVHR HGGRVYVDGA NMNALVGVAA PGEFGGDVSH LNLHKTFCIP
HGGGGPGVGP VCVVEDLVPY LPGHATGGIA SKTGAVSAAP LGNAAVLPIS WMYIRMMGAD
GLQAATETAI LSANYISARL KDHYPTLYAS ANGHVAHECI LDLRQLKDTS GVMAEDVAKR
LIDYGFHAPT LSFPVPNTLM VEPTESETLF ELDRFIDAMI AIRREIRQIE AGTWPQDDNP
LKNAPHTAEC LLVADWQHPY PRDAAAYPVA ALRQNKYWSP VGRVDNVYGD RNLFCSCVPV
SELG
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