| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1934 |
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| Symbol | |
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| ID | 4672969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2024071 |
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| End bp | 2026233 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639839015 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_986190 |
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| Protein GI | 121594294 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.668168 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCC CCGACCTATC CCTGCTGTTT CCCGCCGCGG AGCCTGCCTC GTCCCCCCCT
GAGCAGCCGG AGCGCCGCGG CCCTCAACGG GCCAGCGGCG ACGTGGCCGA GCTGATTGCG
CAGCTGCACG CCTCACAGGC CGAGCTGGAG GCGCAGAACC AGGTGCTGCG CTACAGCCAG
GCCGCGGCCG AAAGCGCTTC CGAGCGATTC GAGGCCCTGT TTTCCAGCGT GCCGCTGTCG
CTCATGGTGG TGGACGAGCA TGACATGGTG GTCCAGGCCA ACTCCATGGC ACAGCGCTCG
TTCCAACCGC GCGAGACGGA CCGCCCCCTG ACGGCACTGA TGCTCTTCGT GAGCGACAGC
CACGCGCCGC GTGTGCGCGA GGCCTTCGAC CAGGCGCGGG CCGTGGGCAC GGCCGAGGCC
ACGGAGGTTG TGTTCCACAT CAGCGAGGGC CGCCATATCA CTGGCGACCT GCACATCGCG
CGCATCGAGT CGCGCTCCGA GCAGGACGCG CCGCTCACGC AGTTTCTGTG CGCCGTGATC
GACCAGGGGC CGCTGCTGGC CGAACGCCAG GCCCTGCAGC GCAGCGCACA GGAGCTGCAG
GAGCGCAACG TGCAACTGCA CACCAGCGAG CGCCGTTTGG AGGCGGTGAT CAACTCCGCG
CTCGACGCGA TCATCTGCGT GGACCAGCAC GAGCGCATCA CCGTGTTCAA TCCCACGGCA
GCGATGCTGT TCCAGTGCGC CACCAGCGAC GCGCTGGGCA GCCCGTTGAG CCGTTTTCTG
CCCGAGGCCC AGCAGGTGCT GGCGTTCGCG CAACTGACCA CGCAGGCGGC GCTGGGGGAG
ATGACGGCGC TCACGGCATC GGGCCGCGAG CTGGCGGTGG AGATCAGCGT GTCGTTCGAG
CGCCATGCGG AAGGCGAGAC CACCACCGTG TTTGCCCGCG ACCTTACGGC CCGCAAGCGC
GAAGAAGCCC GCCGCAACGC GCTGGAGGGA CAGCTGCGCG AGTCGCACAA GATGCAGGCC
GTCGGCACCA TGGCTGGCGG CATCGCGCAC GACTTCAACA ACATCCTGCA TGCGATCCTG
GGCAACGTGG AGCTGGCCAA AGCCGATTGC CCGCCCGGCA CGCCGATGTA CGAAAGCCTG
CTGGAAATCG ACAAGGCCGG CCGGCGCGCC CGCGACCTGG TGCGGCAGAT CCTCACCTTC
AGCCGCAACG AGCCGCCCAA GCGTGCCGCC GTCACCCTGG CAGAGGTGGT GCACGACACC
GAACGGCTCC TGAGGGTCAC GCTGCCCCCT GAGATCGAGC TGACCGTGCA TGTCCCCCCC
GACCTGCCCC CCGTATTGGC GGATGCCACG CAGGTGGAGC AAGCGGTGCT GAACCTATGC
ACCAACGCCG TGCACGCCAT CGGCAGCCGC CGTGGCCGCA TTCGCGTGGA TGCTGCGCTG
ATCCAGCCCG ACCAGCGCAT GCGCGAGAGC CTGGGCCTGA GTGCGGGCGA CTACGTGGCC
GTGCGCGTGC ATGACAACGG CCCGGGCATG GACGCCGCCA CCCAGTCGCG CATCTTCGAA
CCCTTCTTCA CCACCAAGCC CGTGGGCCAG GGCACCGGCC TGGGACTGGC GGTGGTGCAC
GGCGTGATGC GCACCCACGG TGGTGGCGTG GACGTGCACA GCGCACCCGG CGAGGGCAGC
CGCTTCACGC TGTACTTTCC CGTGGCGTCG TACACCATGG TGGCCGCCCT GCCGGAGGTT
CCCGCGCCGG TCGCGCCCGC CAGCCCGCCC GCGGTGGCGC CGGCAACAGA CCGTCTGCTG
CACGTGATGT ACGTGGACGA CGACGAGGCG CTGGTCTTTC TGGTGCAGCG CCTGCTGCGC
CGCCGCGGCT ACGAGGTCAG CGGTTTCACC GACCCGCACC AAGCCACAGA CGCCCTGCAG
GCCCACCCCG AGCGCTACGA CCTGCTGGTG ACGGACTACA ACATGCCGGG CTACTCGGGC
CTGGATCTCG TGCGCGCGGC CCGCACCATC CGCAGCGACC TGCCAGTGGC CCTGGCCTCC
GGCTATGTAA CGGCGGAAAT CGAACAGGCC GCGCTGGCCG AAGGCGCACG CGCGCTGATC
CACAAGCCCG ATGACGTGGA AGAGCTGTGC GCGACCGTGG ACCGGCTGGC CCATGGCGGT
TGA
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| Protein sequence | MSRPDLSLLF PAAEPASSPP EQPERRGPQR ASGDVAELIA QLHASQAELE AQNQVLRYSQ
AAAESASERF EALFSSVPLS LMVVDEHDMV VQANSMAQRS FQPRETDRPL TALMLFVSDS
HAPRVREAFD QARAVGTAEA TEVVFHISEG RHITGDLHIA RIESRSEQDA PLTQFLCAVI
DQGPLLAERQ ALQRSAQELQ ERNVQLHTSE RRLEAVINSA LDAIICVDQH ERITVFNPTA
AMLFQCATSD ALGSPLSRFL PEAQQVLAFA QLTTQAALGE MTALTASGRE LAVEISVSFE
RHAEGETTTV FARDLTARKR EEARRNALEG QLRESHKMQA VGTMAGGIAH DFNNILHAIL
GNVELAKADC PPGTPMYESL LEIDKAGRRA RDLVRQILTF SRNEPPKRAA VTLAEVVHDT
ERLLRVTLPP EIELTVHVPP DLPPVLADAT QVEQAVLNLC TNAVHAIGSR RGRIRVDAAL
IQPDQRMRES LGLSAGDYVA VRVHDNGPGM DAATQSRIFE PFFTTKPVGQ GTGLGLAVVH
GVMRTHGGGV DVHSAPGEGS RFTLYFPVAS YTMVAALPEV PAPVAPASPP AVAPATDRLL
HVMYVDDDEA LVFLVQRLLR RRGYEVSGFT DPHQATDALQ AHPERYDLLV TDYNMPGYSG
LDLVRAARTI RSDLPVALAS GYVTAEIEQA ALAEGARALI HKPDDVEELC ATVDRLAHGG
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