Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1924 |
Symbol | |
ID | 4672439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 2014342 |
End bp | 2015421 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639839005 |
Product | integrase catalytic subunit |
Protein accession | YP_986180 |
Protein GI | 121594284 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0504848 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCACC CTGGACGCCC CGCCACGAAG CTGCAGATCA CCGATGCCGA GCGCGCAGAG CTGCATGCGC GACTGCGCGT ACGCAAAGCG CCCGAGGACG AGAAGCTGCG CATGCGAATC GTGCTGGGCT GCGCAGATGG GGAGTCGGGC ACCATGATTG CCCAACGCTT GGGCACGACG GTGCAAACTG TCTCCAAGTG GCGGCGGCGC TACCGGGCGT ATCGTCTGGC GGGTTTGACC GATGCCCCGC GCGCTGGCCG CCCGCGCAGT GTGGGCGACG AGCAGGTTCA GCTCATTGTG GACAAGGTTC GCCAGAGCAA GCCTGACAAC GCCACGCACT GGAGCGTGCG CCAGATGAGT CGGCACGCTG GCGTATCGCC CGCGACGGTG CAGCGCATCT GGCATGCCTT TGGGCTGAAG CCGCACCTGC AAGAAACCTT CAAGCTATCG ACGGATCCCC ATTTCGTGGA CAAGGTACGG GATGTGGTGG GGCTGTATAT GGCACCACCC GATCGCGCCT TGGTGCTGTG CGTGGACGAG AAGAGCCAGA TCCAGGCTCT GGATCGCACC CAACCAGGGT TACCACTGAC GTTTGGCAAA CCCAGCACGC GCACGCACGA TTACAAGCGC CATGGCACAA CGTCGCTGTT TGCAGCGCTG GATGTGGCCA CTGGCAAAGT CATAGGACAG CTCAAGCGCC GTCACCGCAG TGTGGAATTC CTGCAGTTCC TCAAAGCCAT CGATGCAGCG GTGCCTGGCG AACAAGACAT CCACCTGATC ATGGACAACT ACGGCACGCA CAAGACGCAG GCAGTGCGGG CCTGGCTAGC AGCCCATCCT CGCTACCACG TTCACTTCAC GCCCACCTCA GCGTCCTGGC TCAATCTGGT CGAGCGTTTC TTTAGCCAGA TCAGCGAGCA GTGGATCAAG CGCAGCGCCC ACACCAGCGT TGCTCAGCTG GAGCAATCCA TACGGGAATA CATTGATCGT CACAACGAGG ATCCCAAGCC GTTCGTGTGG CATAAAAGTG CGGACACCAT CTTGGCATCT GTGGCGCGGG CAGCGAGTAC CATTATTTGA
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Protein sequence | MAHPGRPATK LQITDAERAE LHARLRVRKA PEDEKLRMRI VLGCADGESG TMIAQRLGTT VQTVSKWRRR YRAYRLAGLT DAPRAGRPRS VGDEQVQLIV DKVRQSKPDN ATHWSVRQMS RHAGVSPATV QRIWHAFGLK PHLQETFKLS TDPHFVDKVR DVVGLYMAPP DRALVLCVDE KSQIQALDRT QPGLPLTFGK PSTRTHDYKR HGTTSLFAAL DVATGKVIGQ LKRRHRSVEF LQFLKAIDAA VPGEQDIHLI MDNYGTHKTQ AVRAWLAAHP RYHVHFTPTS ASWLNLVERF FSQISEQWIK RSAHTSVAQL EQSIREYIDR HNEDPKPFVW HKSADTILAS VARAASTII
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