Gene Ajs_1916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1916 
Symbol 
ID4672392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2006981 
End bp2008069 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content63% 
IMG OID639838997 
Producttransposase, IS4 family protein 
Protein accessionYP_986172 
Protein GI121594276 
COG category[L] Replication, recombination and repair 
COG ID[COG3666] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.176419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGGCA GTCAAGATTT CCAGGGGGCG ATGTTCAGCT ACATCAGCCT TGAAGAGCGC 
GTGCCGCAGG CACACCCGCT GCGCAAGTTG CGCGCGGTGG TTGATGCGCT GCTGGCAACC
ATGAACCGCG AGTTCGAAGC GGTGTACGCC CGCCGTGGCC GCCCATCGGT GCCACCGGAG
ATGCTGCTCA AGGCCTTGCT GCTGCAGATC CTGTTCTCCA TCCGCAGCGA GCGCCAGTTG
GTCGAAGCGA TCAACTACAA CCTGCTGTAC CGCTGGTTCG TGGGCCTGAA CATCGAAGAC
AAGGTCTGGG ACCACTCCAC TTTCAGCGCC AACCGCGAAC GTCTGTTCAA CGAAGACCTC
GCCCGCGCCT TCTTCGAGCG CGTCAAGCTC AGTGCCCAGT GGGGCAAGCT CGCCAGCGAC
GAGCACTTCA GCGTGGACGG CACGCTCATT GACGCCTGGG CCTCGCACAA GAGCTTCAAG
CGCAAAGACG ACGACAGCGG CACGCCGCCT GGGCGCAACC CCGAGGTGGA CTTCAAGGGG
CAGGAGCGCT GCAACGACAC CCACGAGAGC ACCACGGACG CCGATGCCCG GCTGTTCAAG
AAGAGCCAGG GCGACAAATC CCGCCTGTGC CACATGGGGC ACATCCTCAT GGAGAACCGC
AACGGGCTGA TCGTGGATGT CGAGATCACC CACGCCAGCG GCACGGCCGA GCGCGAGGCG
GCGCTGGCCA TGTTGGAGCG TCGGGGCAAC AGGAACAAAC GGGCCACGGT CGGTGCCGAC
AAGGGCTACG ACAGCAAGGC CTTCATCAAA GGCTGCAGAA AGCTCAAAGT CACGCCCCAC
GTGGCGGCCA AGGACAAACA CTCGGCGGTG GATGCGCGAG TGACACGGCA CGAGGGCTAC
AAGACCAGCC TGAAGGTGCG CAAGCGCATC GAAGAGGCCT TTGGCTGGAT CAAGACCGTC
GGTGGTCTGG CAAAGACCAA GCTGATCGGT CAGGCCAAGC TCACGGGCCA GGCGCTGCTG
TGCTTTGCCA CCTACAACCT TGTGCGAATG GGCAGCATCG GCGGCTGGTG GGACGCGCAT
CATGCGTGA
 
Protein sequence
MRGSQDFQGA MFSYISLEER VPQAHPLRKL RAVVDALLAT MNREFEAVYA RRGRPSVPPE 
MLLKALLLQI LFSIRSERQL VEAINYNLLY RWFVGLNIED KVWDHSTFSA NRERLFNEDL
ARAFFERVKL SAQWGKLASD EHFSVDGTLI DAWASHKSFK RKDDDSGTPP GRNPEVDFKG
QERCNDTHES TTDADARLFK KSQGDKSRLC HMGHILMENR NGLIVDVEIT HASGTAEREA
ALAMLERRGN RNKRATVGAD KGYDSKAFIK GCRKLKVTPH VAAKDKHSAV DARVTRHEGY
KTSLKVRKRI EEAFGWIKTV GGLAKTKLIG QAKLTGQALL CFATYNLVRM GSIGGWWDAH
HA