| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1907 |
|---|
| Symbol | |
|---|
| ID | 4671980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 1997328 |
|---|
| End bp | 1997810 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639838988 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_986163 |
|---|
| Protein GI | 121594267 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTTG ATGCCTTCGA CCGTGCGCTG ATCGCCGCCA CGCAGGGCGG GCTGCCGCTG
GTGGCGCGCC CCTACGAAGC CGTGGGCGCC ATGCTGGGCG TGCCTGGCGA GCAGGTACGC
GAGCGCCTGG CCCGGATGAT CGACGAGGGC CTGGTGCGCC GCATCGGCGC GGTGCCCAAC
CATTACCGCC TGGGCTACAC GGCCAACGGC ATGAGCGTGT GGGACGTGGA CGATACCCAG
GTCGCCGCGC TGGGCCGCCA AGTCGCCGCG CTGCCGGGCG TGAGCCACTG CTACCGCCGC
CCGCGCCACC TGCCCCACTG GCCCTACAAC CTGTTTGCCA TGCTGCATGG CCCCAGCCGC
GCGCATGTCG AGCAACAGGC CGAGCAGATT GCCGGCCTGC TGGGCGATGC CTGCCGCGCC
CACGACATCC TGTACTCCAC GGCCATCCTC AAGAAGACCG GCCTGCGCCT CAAGGAAGAC
TGA
|
|---|
| Protein sequence | MALDAFDRAL IAATQGGLPL VARPYEAVGA MLGVPGEQVR ERLARMIDEG LVRRIGAVPN
HYRLGYTANG MSVWDVDDTQ VAALGRQVAA LPGVSHCYRR PRHLPHWPYN LFAMLHGPSR
AHVEQQAEQI AGLLGDACRA HDILYSTAIL KKTGLRLKED
|
|---|
| |